STRINGSTRING
LOC103040575 LOC103040575 apex1 apex1 rbm24 rbm24 tbx20 tbx20 lbx1 lbx1 ENSAMXP00000047021 ENSAMXP00000047021 cemip2 cemip2 tbx3 tbx3 LOC111194998 LOC111194998 ENSAMXP00000049034 ENSAMXP00000049034 ENSAMXP00000049285 ENSAMXP00000049285 LOC107197240 LOC107197240 LOC103028441 LOC103028441 W5JYT6_ASTMX W5JYT6_ASTMX HAND1 HAND1 Gdf3 Gdf3 LOC103046625 LOC103046625 W5K0L4_ASTMX W5K0L4_ASTMX W5K0X4_ASTMX W5K0X4_ASTMX LOC103042959 LOC103042959 pdlim7 pdlim7 nek8 nek8 bbs5 bbs5 W5KFS5_ASTMX W5KFS5_ASTMX W5KHG4_ASTMX W5KHG4_ASTMX LOC103047227 LOC103047227 LOC103022398 LOC103022398 Tbx5 Tbx5 TBX10 TBX10 smad5 smad5 chrd chrd W5KZC0_ASTMX W5KZC0_ASTMX W5L0J7_ASTMX W5L0J7_ASTMX LOC103030832 LOC103030832 dzip1 dzip1 LOC103038161 LOC103038161 LOC103042002 LOC103042002 LOC103032648 LOC103032648 gpr22 gpr22 cobl cobl pkd2 pkd2 vdr vdr tgfbr2 tgfbr2 W5LMI9_ASTMX W5LMI9_ASTMX rad21 rad21 invs invs Wtip Wtip LOC103043286 LOC103043286 shh shh LOC103025318 LOC103025318 alcam alcam SRF SRF lrrc6 lrrc6 LOC103027194 LOC103027194 cep162 cep162 zfpm1 zfpm1 foxj1 foxj1 hand2 hand2 ccdc103 ccdc103 LOC103039334 LOC103039334 LOC103045481 LOC103045481 LOC103035944 LOC103035944 sap30l sap30l tbx2 tbx2 smo smo mical2 mical2 ENSAMXP00000037899 ENSAMXP00000037899 dnaaf1 dnaaf1 LOC103047354 LOC103047354 hace1 hace1 ift52 ift52 popdc2 popdc2 LOC103041704 LOC103041704 ENSAMXP00000042910 ENSAMXP00000042910 LOC103042559 LOC103042559 W5K9M8_ASTMX W5K9M8_ASTMX TMED2 TMED2 LOC103029138 LOC103029138 atoh8 atoh8 LOC103025754 LOC103025754
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103040575Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
apex1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (312 aa)
rbm24RNA binding motif protein 24a. (250 aa)
tbx20T-box transcription factor 20. (441 aa)
lbx1Ladybird homeobox 1a. (264 aa)
ENSAMXP00000047021Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1. (658 aa)
cemip2Cell migration inducing hyaluronidase 2. (1264 aa)
tbx3T-box transcription factor 3a. (706 aa)
LOC111194998Transmembrane p24 trafficking protein 2. (202 aa)
ENSAMXP00000049034RRM domain-containing protein. (82 aa)
ENSAMXP00000049285T-box transcription factor 16, like. (425 aa)
LOC107197240BHLH domain-containing protein. (244 aa)
LOC103028441Homeobox domain-containing protein. (275 aa)
W5JYT6_ASTMXAbelson helper integration site 1. (898 aa)
HAND1Heart and neural crest derivatives expressed 1. (157 aa)
Gdf3Growth differentiation factor 3. (360 aa)
LOC103046625Uncharacterized protein. (461 aa)
W5K0L4_ASTMXMADS-box domain-containing protein. (479 aa)
W5K0X4_ASTMXT-box transcription factor 16. (479 aa)
LOC103042959Activated leukocyte cell adhesion molecule b. (564 aa)
pdlim7PDZ and LIM domain 7. (509 aa)
nek8NIMA-related kinase 8. (697 aa)
bbs5Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family. (342 aa)
W5KFS5_ASTMXCoiled-coil domain containing 40. (845 aa)
W5KHG4_ASTMXForkhead box N4. (419 aa)
LOC103047227Uncharacterized protein. (573 aa)
LOC103022398Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (361 aa)
Tbx5T-box transcription factor 5a. (522 aa)
TBX10T-box transcription factor 10. (196 aa)
smad5Mothers against decapentaplegic homolog. (464 aa)
chrdChordin; Belongs to the chordin family. (945 aa)
W5KZC0_ASTMXProtein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization. (347 aa)
W5L0J7_ASTMXVitamin D receptor b. (410 aa)
LOC103030832RAD21 cohesin complex component like 1. (550 aa)
dzip1C2H2-type domain-containing protein. (903 aa)
LOC103038161T-box transcription factor Ta. (422 aa)
LOC103042002Ankyrin repeat and SOCS box containing 2b. (619 aa)
LOC103032648Notochord homeobox. (238 aa)
gpr22G protein-coupled receptor 22b. (477 aa)
coblCordon-bleu WH2 repeat protein. (1452 aa)
pkd2Polycystic kidney disease 2. (903 aa)
vdrVitamin D receptor a. (470 aa)
tgfbr2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (595 aa)
W5LMI9_ASTMXT-box transcription factor 1. (417 aa)
rad21RAD21 cohesin complex component b. (636 aa)
invsInversin. (1051 aa)
WtipWT1 interacting protein. (632 aa)
LOC103043286Forkhead box H1. (533 aa)
shhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (429 aa)
LOC103025318NK2 homeobox 5. (313 aa)
alcamActivated leukocyte cell adhesion molecule a. (565 aa)
SRFSerum response factor. (527 aa)
lrrc6Leucine rich repeat containing 6. (492 aa)
LOC103027194V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family. (350 aa)
cep162Centrosomal protein 162. (1519 aa)
zfpm1Zinc finger protein, FOG family member 1. (1221 aa)
foxj1Fork-head domain-containing protein. (469 aa)
hand2Heart and neural crest derivatives expressed 2. (200 aa)
ccdc103Coiled-coil domain containing 103. (240 aa)
LOC103039334RAD21 cohesin complex component a. (637 aa)
LOC103045481SET domain bifurcated histone lysine methyltransferase 2. (667 aa)
LOC103035944Microtubule associated monooxygenase, calponin and LIM domain containing 2b. (1770 aa)
sap30lSap30-like. (179 aa)
tbx2T-box transcription factor 2b. (692 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (840 aa)
mical2Microtubule associated monooxygenase, calponin and LIM domain containing 2a. (1303 aa)
ENSAMXP00000037899MADS-box domain-containing protein. (356 aa)
dnaaf1Dynein assembly factor 1, axonemal. (588 aa)
LOC103047354Sorting nexin 10a. (230 aa)
hace1HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1. (932 aa)
ift52Intraflagellar transport 52 homolog (Chlamydomonas). (435 aa)
popdc2Popeye domain containing 2. (374 aa)
LOC103041704Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1. (686 aa)
ENSAMXP00000042910Uncharacterized protein. (248 aa)
LOC103042559Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (543 aa)
W5K9M8_ASTMXUncharacterized protein. (174 aa)
TMED2Transmembrane p24 trafficking protein 2. (210 aa)
LOC103029138UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
atoh8BHLH domain-containing protein. (263 aa)
LOC103025754Ubiquitin-conjugating enzyme E2Ia; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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