43 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OTOP1	Otopetrin 1. (594 aa)
	W5KS44_ASTMX	Uncharacterized protein. (153 aa)
	W5KT96_ASTMX	Cylindromatosis (turban tumor syndrome), like. (738 aa)
	LOC103043694	Uncharacterized protein. (465 aa)
	rnf113a	Ring finger protein 113A. (321 aa)
	LOC103043413	Nuclear receptor subfamily 1, group H, member 5. (495 aa)
	mettl3	Methyltransferase like 3; Belongs to the MT-A70-like family. (591 aa)
	ccdc3	Coiled-coil domain containing 3a. (269 aa)
	Adar	Adenosine deaminase RNA specific. (1368 aa)
	ecm1	Extracellular matrix protein 1b. (490 aa)
	nr1h4	Nuclear receptor subfamily 1, group H, member 4. (486 aa)
	W5LQN4_ASTMX	Uncharacterized protein. (965 aa)
	LOC111191578	HD domain-containing protein. (602 aa)
	ENSAMXP00000027924	Tubulin tyrosine ligase-like family, member 12. (599 aa)
	ENSAMXP00000027962	Uncharacterized protein. (65 aa)
	ENSAMXP00000029929	Interleukin 6 signal transducer. (815 aa)
	ENSAMXP00000032410	SH2B adaptor protein 3. (520 aa)
	ENSAMXP00000032804	Coiled-coil domain containing 3b. (310 aa)
	PTPRC	Protein tyrosine phosphatase receptor type C. (809 aa)
	cyld	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (953 aa)
	traip	TRAF-interacting protein. (451 aa)
	mul1	Mitochondrial E3 ubiquitin protein ligase 1b. (352 aa)
	ENSAMXP00000038154	Uncharacterized protein. (139 aa)
	LOC103023460	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)
	ENSAMXP00000039661	annotation not available (65 aa)
	ENSAMXP00000039976	G protein pathway suppressor 2. (133 aa)
	ythdf2	YTH N(6)-methyladenosine RNA binding protein 2. (614 aa)
	Sigirr	Single immunoglobulin and toll-interleukin 1 receptor (TIR) domain. (457 aa)
	gas6	Uncharacterized protein. (659 aa)
	Dcst1	DC-STAMP domain containing 1. (638 aa)
	ENSAMXP00000041617	HD domain-containing protein. (481 aa)
	ENSAMXP00000042552	Uncharacterized protein. (809 aa)
	LOC103027984	RAB guanine nucleotide exchange factor (GEF) 1, like. (503 aa)
	Otud4	Uncharacterized protein. (1093 aa)
	LOC111197473	HD domain-containing protein. (387 aa)
	rabgef1	RAB guanine nucleotide exchange factor (GEF) 1. (556 aa)
	adipoq	Adiponectin, C1Q and collagen domain containing, b. (309 aa)
	LOC103028826	HD domain-containing protein. (687 aa)
	ENSAMXP00000048235	Uncharacterized protein. (70 aa)
	ENSAMXP00000049143	SAM domain and HD domain 1. (535 aa)
	ENSAMXP00000051271	HD domain-containing protein. (161 aa)
	LOC103025033	Apolipoprotein A-Ia. (254 aa)
	ythdf3	YTH N(6)-methyladenosine RNA binding protein 3. (612 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Adar	LOC103023460	ENSAMXP00000016960	ENSAMXP00000038714	Adenosine deaminase RNA specific.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.525
LOC103023460	Adar	ENSAMXP00000038714	ENSAMXP00000016960	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Adenosine deaminase RNA specific.	0.525
LOC103027984	rabgef1	ENSAMXP00000043134	ENSAMXP00000046803	RAB guanine nucleotide exchange factor (GEF) 1, like.	RAB guanine nucleotide exchange factor (GEF) 1.	0.597
W5KT96_ASTMX	W5LQN4_ASTMX	ENSAMXP00000010808	ENSAMXP00000022455	Cylindromatosis (turban tumor syndrome), like.	Uncharacterized protein.	0.904
W5KT96_ASTMX	cyld	ENSAMXP00000010808	ENSAMXP00000033073	Cylindromatosis (turban tumor syndrome), like.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.905
W5KT96_ASTMX	traip	ENSAMXP00000010808	ENSAMXP00000034932	Cylindromatosis (turban tumor syndrome), like.	TRAF-interacting protein.	0.409
W5LQN4_ASTMX	W5KT96_ASTMX	ENSAMXP00000022455	ENSAMXP00000010808	Uncharacterized protein.	Cylindromatosis (turban tumor syndrome), like.	0.904
W5LQN4_ASTMX	cyld	ENSAMXP00000022455	ENSAMXP00000033073	Uncharacterized protein.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.905
cyld	W5KT96_ASTMX	ENSAMXP00000033073	ENSAMXP00000010808	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	Cylindromatosis (turban tumor syndrome), like.	0.905
cyld	W5LQN4_ASTMX	ENSAMXP00000033073	ENSAMXP00000022455	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	Uncharacterized protein.	0.905
cyld	traip	ENSAMXP00000033073	ENSAMXP00000034932	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	TRAF-interacting protein.	0.409
mettl3	ythdf2	ENSAMXP00000013282	ENSAMXP00000040056	Methyltransferase like 3; Belongs to the MT-A70-like family.	YTH N(6)-methyladenosine RNA binding protein 2.	0.532
mettl3	ythdf3	ENSAMXP00000013282	ENSAMXP00000054805	Methyltransferase like 3; Belongs to the MT-A70-like family.	YTH N(6)-methyladenosine RNA binding protein 3.	0.532
rabgef1	LOC103027984	ENSAMXP00000046803	ENSAMXP00000043134	RAB guanine nucleotide exchange factor (GEF) 1.	RAB guanine nucleotide exchange factor (GEF) 1, like.	0.597
traip	W5KT96_ASTMX	ENSAMXP00000034932	ENSAMXP00000010808	TRAF-interacting protein.	Cylindromatosis (turban tumor syndrome), like.	0.409
traip	cyld	ENSAMXP00000034932	ENSAMXP00000033073	TRAF-interacting protein.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.409
ythdf2	mettl3	ENSAMXP00000040056	ENSAMXP00000013282	YTH N(6)-methyladenosine RNA binding protein 2.	Methyltransferase like 3; Belongs to the MT-A70-like family.	0.532
ythdf3	mettl3	ENSAMXP00000054805	ENSAMXP00000013282	YTH N(6)-methyladenosine RNA binding protein 3.	Methyltransferase like 3; Belongs to the MT-A70-like family.	0.532