44 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	flrt3	Fibronectin leucine rich transmembrane 3. (649 aa)
	RHOB	Ras homolog family member B. (163 aa)
	SRF	Serum response factor. (527 aa)
	ccn1	Cellular communication network factor 1. (372 aa)
	LOC111191160	CD44 molecule (Indian blood group) a. (454 aa)
	mab21l2	Mab-21-like 2. (359 aa)
	PHACTR1	Phosphatase and actin regulator. (603 aa)
	fgf8	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (210 aa)
	LOC103045346	SRY-box transcription factor 19b. (285 aa)
	LOC103031338	Ras homolog family member Cb. (195 aa)
	W5K0L4_ASTMX	MADS-box domain-containing protein. (479 aa)
	bves	Blood vessel epicardial substance. (359 aa)
	ajuba	Ajuba LIM protein. (691 aa)
	chuk	Component of inhibitor of nuclear factor kappa B kinase complex. (755 aa)
	LOC103041996	ADAM metallopeptidase domain 17b. (841 aa)
	vax2	Ventral anterior homeobox 2. (312 aa)
	W5KJA9_ASTMX	Si:ch211-247j9.1. (624 aa)
	Tbx5	T-box transcription factor 5a. (522 aa)
	pitx2	Homeobox protein. (300 aa)
	LOC103036206	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (547 aa)
	ENSAMXP00000054028	Uncharacterized protein. (193 aa)
	LOC103027828	Heparin-binding EGF-like growth factor a. (241 aa)
	LOC103027457	Ras homolog gene family, member Ab. (193 aa)
	LOC103035456	Ras homolog family member Ca. (193 aa)
	prmt7	Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA), with a preference for the formation of MMA. Specifically mediates the symmetrical dimethylation of arginine residues in the small nuclear ribonucleoproteins Sm D1 (SNRPD1) and Sm D3 (SNRPD3); such methylation being required for the assembly and biogenesis of snRNP core particles. Specifically mediates the symmetric dimethylation of histone H4 'Arg-3' to form H4R3me2s. Plays a role in gene imprinting by being r [...] (683 aa)
	ENSAMXP00000040707	POU domain, class 5, transcription factor 3. (458 aa)
	Cd44	Link domain-containing protein. (75 aa)
	LOC103038514	LRRCT domain-containing protein. (327 aa)
	ENSAMXP00000037899	MADS-box domain-containing protein. (356 aa)
	LOC103025626	Heparin-binding EGF-like growth factor b. (213 aa)
	LOC103046091	Phosphatase and actin regulator 4a. (1040 aa)
	mpp5	Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family. (658 aa)
	LOC103041872	Phosphatase and actin regulator. (919 aa)
	LOC103029431	Uncharacterized protein. (193 aa)
	Arhgap24	Rho GTPase activating protein 24. (641 aa)
	LOC103043088	Membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5); Belongs to the MAGUK family. (713 aa)
	slc39a10	Solute carrier family 39 member 10. (875 aa)
	Dag1	Dystroglycan 1. (874 aa)
	LOC103028705	Ras homolog gene family, member Aa. (193 aa)
	W5LD95_ASTMX	ADAM metallopeptidase domain 17a. (675 aa)
	LOC103035433	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (514 aa)
	LOC103026967	Uncharacterized protein. (740 aa)
	LOC103025241	Apelin receptor a; Belongs to the G-protein coupled receptor 1 family. (359 aa)
	MAB21L1	Mab-21-like 1. (359 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cd44	ENSAMXP00000040707	ENSAMXP00000040116	ENSAMXP00000040707	Link domain-containing protein.	POU domain, class 5, transcription factor 3.	0.442
Cd44	LOC103025626	ENSAMXP00000040116	ENSAMXP00000035224	Link domain-containing protein.	Heparin-binding EGF-like growth factor b.	0.467
Cd44	LOC103027828	ENSAMXP00000040116	ENSAMXP00000049923	Link domain-containing protein.	Heparin-binding EGF-like growth factor a.	0.467
Cd44	LOC111191160	ENSAMXP00000040116	ENSAMXP00000031697	Link domain-containing protein.	CD44 molecule (Indian blood group) a.	0.900
Cd44	fgf8	ENSAMXP00000040116	ENSAMXP00000032559	Link domain-containing protein.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.434
ENSAMXP00000037899	ENSAMXP00000054028	ENSAMXP00000037899	ENSAMXP00000054028	MADS-box domain-containing protein.	Uncharacterized protein.	0.865
ENSAMXP00000040707	Cd44	ENSAMXP00000040707	ENSAMXP00000040116	POU domain, class 5, transcription factor 3.	Link domain-containing protein.	0.442
ENSAMXP00000040707	LOC103045346	ENSAMXP00000040707	ENSAMXP00000033060	POU domain, class 5, transcription factor 3.	SRY-box transcription factor 19b.	0.810
ENSAMXP00000040707	LOC111191160	ENSAMXP00000040707	ENSAMXP00000031697	POU domain, class 5, transcription factor 3.	CD44 molecule (Indian blood group) a.	0.442
ENSAMXP00000054028	ENSAMXP00000037899	ENSAMXP00000054028	ENSAMXP00000037899	Uncharacterized protein.	MADS-box domain-containing protein.	0.865
ENSAMXP00000054028	LOC103035433	ENSAMXP00000054028	ENSAMXP00000018040	Uncharacterized protein.	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	0.425
ENSAMXP00000054028	LOC103036206	ENSAMXP00000054028	ENSAMXP00000054516	Uncharacterized protein.	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	0.425
ENSAMXP00000054028	SRF	ENSAMXP00000054028	ENSAMXP00000028964	Uncharacterized protein.	Serum response factor.	0.865
ENSAMXP00000054028	W5K0L4_ASTMX	ENSAMXP00000054028	ENSAMXP00000001124	Uncharacterized protein.	MADS-box domain-containing protein.	0.865
LOC103025626	Cd44	ENSAMXP00000035224	ENSAMXP00000040116	Heparin-binding EGF-like growth factor b.	Link domain-containing protein.	0.467
LOC103025626	LOC103027828	ENSAMXP00000035224	ENSAMXP00000049923	Heparin-binding EGF-like growth factor b.	Heparin-binding EGF-like growth factor a.	0.905
LOC103025626	LOC111191160	ENSAMXP00000035224	ENSAMXP00000031697	Heparin-binding EGF-like growth factor b.	CD44 molecule (Indian blood group) a.	0.467
LOC103027828	Cd44	ENSAMXP00000049923	ENSAMXP00000040116	Heparin-binding EGF-like growth factor a.	Link domain-containing protein.	0.467
LOC103027828	LOC103025626	ENSAMXP00000049923	ENSAMXP00000035224	Heparin-binding EGF-like growth factor a.	Heparin-binding EGF-like growth factor b.	0.905
LOC103027828	LOC111191160	ENSAMXP00000049923	ENSAMXP00000031697	Heparin-binding EGF-like growth factor a.	CD44 molecule (Indian blood group) a.	0.467