STRINGSTRING
LOC103039097 LOC103039097 Eif2ak3 Eif2ak3 gnptab gnptab LOC103024223 LOC103024223 ecm1 ecm1 tgfbr2 tgfbr2 LOC103025695 LOC103025695 LOC103043606 LOC103043606 LOC103042468 LOC103042468 LOC103042774 LOC103042774 Bmpr2 Bmpr2 LOC103040552 LOC103040552 ENSAMXP00000040343 ENSAMXP00000040343 sulf1 sulf1 LOC103042559 LOC103042559 LOC103029481 LOC103029481 LOC103046764 LOC103046764 LOC103041475 LOC103041475
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103039097Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b; Belongs to the serpin family. (408 aa)
Eif2ak3Eukaryotic translation initiation factor 2-alpha kinase 3. (943 aa)
gnptabN-acetylglucosamine-1-phosphate transferase subunits alpha and beta. (1220 aa)
LOC103024223Secreted frizzled-related protein 2 like. (312 aa)
ecm1Extracellular matrix protein 1b. (490 aa)
tgfbr2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (595 aa)
LOC103025695Extracellular sulfatase. (869 aa)
LOC103043606Uncharacterized protein. (347 aa)
LOC103042468Uncharacterized protein. (347 aa)
LOC103042774Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a; Belongs to the serpin family. (403 aa)
Bmpr2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1070 aa)
LOC103040552Sulfatase 2b. (1101 aa)
ENSAMXP00000040343Tsukushi small leucine rich proteoglycan homolog (Xenopus laevis). (342 aa)
sulf1Sulfatase 1. (1166 aa)
LOC103042559Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (543 aa)
LOC103029481Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family. (208 aa)
LOC103046764Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (210 aa)
LOC103041475Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1048 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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