STRINGSTRING
W5LKH9_ASTMX W5LKH9_ASTMX hmces hmces parp3 parp3 ENSAMXP00000037285 ENSAMXP00000037285 ENSAMXP00000035313 ENSAMXP00000035313 W5LFE7_ASTMX W5LFE7_ASTMX LOC103025343 LOC103025343 W5LD04_ASTMX W5LD04_ASTMX msh2 msh2 LOC103035380 LOC103035380 W5KSM1_ASTMX W5KSM1_ASTMX ENSAMXP00000052711 ENSAMXP00000052711 tgfb2 tgfb2 clcf1 clcf1 ENSAMXP00000047619 ENSAMXP00000047619 LOC103037523 LOC103037523 kmt5b kmt5b exosc3 exosc3 ENSAMXP00000043107 ENSAMXP00000043107 ENSAMXP00000042552 ENSAMXP00000042552 LOC111190374 LOC111190374 shld2 shld2 W5LTF5_ASTMX W5LTF5_ASTMX LOC107197146 LOC107197146 ENSAMXP00000030600 ENSAMXP00000030600 PTPRC PTPRC LOC103044392 LOC103044392 tgfb1 tgfb1 LOC103021873 LOC103021873 LOC103041009 LOC103041009 W5L5M7_ASTMX W5L5M7_ASTMX Nsd2 Nsd2 rif1 rif1 LOC103024607 LOC103024607 Tbx21 Tbx21
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5LKH9_ASTMXCD226 molecule. (348 aa)
hmcesAbasic site processing protein HMCES; Sensor of abasic sites in single-stranded DNA (ssDNA) required to preserve genome integrity by promoting error-free repair of abasic sites. Acts as an enzyme that recognizes and binds abasic sites in ssDNA at replication forks and chemically modifies the lesion by forming a covalent cross-link with DNA. The HMCES DNA-protein cross- link is then degraded by the proteasome. Promotes error-free repair of abasic sites by acting as a 'suicide' enzyme that is degraded, thereby protecting abasic sites from translesion synthesis (TLS) polymerases and endon [...] (358 aa)
parp3Poly [ADP-ribose] polymerase. (631 aa)
ENSAMXP00000037285MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli). (689 aa)
ENSAMXP00000035313SET domain-containing protein. (2185 aa)
W5LFE7_ASTMXTumor protein p53 binding protein, 1. (1622 aa)
LOC103025343SET domain-containing protein. (876 aa)
W5LD04_ASTMXUncharacterized protein. (328 aa)
msh2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (939 aa)
LOC103035380Uncharacterized protein. (444 aa)
W5KSM1_ASTMXATPase family AAA domain containing 5a. (1807 aa)
ENSAMXP00000052711ATPase family AAA domain containing 5b. (772 aa)
tgfb2Transforming growth factor beta; Belongs to the TGF-beta family. (401 aa)
clcf1Cardiotrophin-like cytokine factor 1. (375 aa)
ENSAMXP00000047619CD40 molecule, TNF receptor superfamily member 5. (353 aa)
LOC103037523Uncharacterized protein. (377 aa)
kmt5bLysine methyltransferase 5B. (829 aa)
exosc3Exosome component 3. (245 aa)
ENSAMXP00000043107TNF superfamily member 13; Belongs to the tumor necrosis factor family. (170 aa)
ENSAMXP00000042552Uncharacterized protein. (809 aa)
LOC111190374Uncharacterized protein. (256 aa)
shld2Si:ch211-134m17.9. (855 aa)
W5LTF5_ASTMXZgc:101664. (247 aa)
LOC107197146Uncharacterized protein. (567 aa)
ENSAMXP00000030600Uncharacterized protein. (69 aa)
PTPRCProtein tyrosine phosphatase receptor type C. (809 aa)
LOC103044392Uncharacterized protein. (300 aa)
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
LOC103021873Uncharacterized protein. (575 aa)
LOC103041009Tumor necrosis factor b (TNF superfamily, member 2). (247 aa)
W5L5M7_ASTMXTHO complex 1. (613 aa)
Nsd2Nuclear receptor binding SET domain protein 2. (1468 aa)
rif1Replication timing regulatory factor 1. (2429 aa)
LOC103024607Transforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
Tbx21T-box transcription factor 21. (577 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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