STRINGSTRING
LOC103042559 LOC103042559 tgfb1 tgfb1 cemip2 cemip2 Tbx5 Tbx5 Rb1 Rb1 pdlim7 pdlim7 LOC103024607 LOC103024607 LOC103043830 LOC103043830 LOC103043091 LOC103043091 LOC103030832 LOC103030832 LOC103033399 LOC103033399 ENSAMXP00000044530 ENSAMXP00000044530 LOC103041475 LOC103041475 LOC103021450 LOC103021450 ENSAMXP00000053345 ENSAMXP00000053345 mtor mtor W5LD66_ASTMX W5LD66_ASTMX LOC103022359 LOC103022359 LOC103029394 LOC103029394 tgfbr2 tgfbr2 rad21 rad21 krit1 krit1 LOC103027015 LOC103027015 ENSAMXP00000028486 ENSAMXP00000028486 ccn1 ccn1 Bmpr2 Bmpr2 LOC103039334 LOC103039334 hace1 hace1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103042559Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (543 aa)
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
cemip2Cell migration inducing hyaluronidase 2. (1264 aa)
Tbx5T-box transcription factor 5a. (522 aa)
Rb1Retinoblastoma 1. (882 aa)
pdlim7PDZ and LIM domain 7. (509 aa)
LOC103024607Transforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
LOC103043830Ephrin-A1a; Belongs to the ephrin family. (224 aa)
LOC103043091Elastin microfibril interfacer 1a. (1050 aa)
LOC103030832RAD21 cohesin complex component like 1. (550 aa)
LOC103033399Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (419 aa)
ENSAMXP00000044530Elastin microfibril interfacer 1b. (992 aa)
LOC103041475Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1048 aa)
LOC103021450Ephrin-A1b; Belongs to the ephrin family. (233 aa)
ENSAMXP00000053345MH1 domain-containing protein. (187 aa)
mtorSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2518 aa)
W5LD66_ASTMXMothers against decapentaplegic homolog. (573 aa)
LOC103022359Mothers against decapentaplegic homolog. (587 aa)
LOC103029394Mothers against decapentaplegic homolog. (544 aa)
tgfbr2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (595 aa)
rad21RAD21 cohesin complex component b. (636 aa)
krit1KRIT1 ankyrin repeat containing. (741 aa)
LOC103027015Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (393 aa)
ENSAMXP00000028486Mothers against decapentaplegic homolog. (493 aa)
ccn1Cellular communication network factor 1. (372 aa)
Bmpr2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1070 aa)
LOC103039334RAD21 cohesin complex component a. (637 aa)
hace1HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1. (932 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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