STRINGSTRING
ENSAMXP00000031886 ENSAMXP00000031886 ENSAMXP00000031926 ENSAMXP00000031926 PPP1R1B PPP1R1B cdk12 cdk12 LOC103033248 LOC103033248 ice1 ice1 LOC103040586 LOC103040586 ddx21 ddx21 ssu72 ssu72 setd2 setd2 plac8 plac8 gtf2b gtf2b gtf2a1 gtf2a1 Xbp1 Xbp1 med1 med1 mterf4 mterf4 Ccnt1 Ccnt1 eny2 eny2 tceanc2 tceanc2 SRF SRF LOC103025318 LOC103025318 ENSAMXP00000028486 ENSAMXP00000028486 gtf2e1 gtf2e1 LOC103044020 LOC103044020 ENSAMXP00000027930 ENSAMXP00000027930 LOC103026155 LOC103026155 ENSAMXP00000027652 ENSAMXP00000027652 LOC103029354 LOC103029354 LOC103029048 LOC103029048 W5LTQ8_ASTMX W5LTQ8_ASTMX zbtb1 zbtb1 taf13 taf13 LOC103029013 LOC103029013 LOC103029661 LOC103029661 W5LS26_ASTMX W5LS26_ASTMX Mterf2 Mterf2 nfil3 nfil3 W5LRM9_ASTMX W5LRM9_ASTMX LOC103042992 LOC103042992 supt16h supt16h Gtf2e2 Gtf2e2 prmt5 prmt5 W5LP72_ASTMX W5LP72_ASTMX paf1 paf1 W5LNV2_ASTMX W5LNV2_ASTMX LOC103040939 LOC103040939 nr1h4 nr1h4 polr3b polr3b Gtf2a1l Gtf2a1l rbmx rbmx LOC103031530 LOC103031530 polr2l polr2l THAP1 THAP1 brf1 brf1 ENSAMXP00000033395 ENSAMXP00000033395 LOC103037830 LOC103037830 mlf1 mlf1 supt3h supt3h Gtf3c1 Gtf3c1 MSX1 MSX1 ENSAMXP00000034843 ENSAMXP00000034843 taf8 taf8 ENSAMXP00000035178 ENSAMXP00000035178 LOC103025922 LOC103025922 gpbp1l1 gpbp1l1 LOC103046486 LOC103046486 taf12 taf12 LOC103043816 LOC103043816 LOC103023776 LOC103023776 hoxb9 hoxb9 ENSAMXP00000037494 ENSAMXP00000037494 ENSAMXP00000037899 ENSAMXP00000037899 brf2 brf2 MYOCD MYOCD ENSAMXP00000038378 ENSAMXP00000038378 LOC103044436 LOC103044436 ENSAMXP00000038736 ENSAMXP00000038736 polr2a polr2a ENSAMXP00000039272 ENSAMXP00000039272 ENSAMXP00000039282 ENSAMXP00000039282 ENSAMXP00000039508 ENSAMXP00000039508 Crcp Crcp polr1b polr1b xrn2 xrn2 ELOB-2 ELOB-2 ercc3 ercc3 ENSAMXP00000040725 ENSAMXP00000040725 TCEANC TCEANC gtf3c6 gtf3c6 polr2i polr2i Dhx9 Dhx9 ccdc124 ccdc124 DDX5 DDX5 snapc3 snapc3 ENSAMXP00000041936 ENSAMXP00000041936 ENSAMXP00000041999 ENSAMXP00000041999 taf1a taf1a W5L1C8_ASTMX W5L1C8_ASTMX POLR2F POLR2F polr2c polr2c W5KZQ7_ASTMX W5KZQ7_ASTMX Ercc6 Ercc6 bcl9 bcl9 LOC103023591 LOC103023591 LOC103039831 LOC103039831 LOC103043413 LOC103043413 twnk twnk Dnmt1 Dnmt1 polr1c polr1c Rpap1 Rpap1 Polr1a Polr1a W5KWB2_ASTMX W5KWB2_ASTMX W5KW74_ASTMX W5KW74_ASTMX Runx1t1 Runx1t1 ar ar taf11 taf11 W5KU27_ASTMX W5KU27_ASTMX LOC103046861 LOC103046861 ctr9 ctr9 Scaf1 Scaf1 LOC103022779 LOC103022779 LOC103025545 LOC103025545 ttf1 ttf1 W5KQI5_ASTMX W5KQI5_ASTMX W5KPZ4_ASTMX W5KPZ4_ASTMX Tbx5 Tbx5 supt5h supt5h ercc2 ercc2 polr2d polr2d wdr61 wdr61 LOC103025442 LOC103025442 ENSAMXP00000042638 ENSAMXP00000042638 prdm4 prdm4 LOC103029568 LOC103029568 etv1 etv1 fubp3 fubp3 gtf2h1 gtf2h1 LOC103022359 LOC103022359 polrmt polrmt tcea1 tcea1 polr1e polr1e gtf2h4 gtf2h4 znrd1 znrd1 polr3c polr3c LOC103039714 LOC103039714 snapc4 snapc4 polr2j polr2j LOC103044365 LOC103044365 gtf2ird1 gtf2ird1 W5KJ62_ASTMX W5KJ62_ASTMX W5KIT2_ASTMX W5KIT2_ASTMX W5KHS7_ASTMX W5KHS7_ASTMX sirt7 sirt7 ell2 ell2 W5KGB2_ASTMX W5KGB2_ASTMX gcm2 gcm2 taf6l taf6l taf3 taf3 ell ell xab2 xab2 Mars Mars W5LD66_ASTMX W5LD66_ASTMX Ino80 Ino80 W5LD23_ASTMX W5LD23_ASTMX LOC103031807 LOC103031807 MTERF1 MTERF1 E2f1 E2f1 adrm1 adrm1 W5LAU2_ASTMX W5LAU2_ASTMX Gtf3c5 Gtf3c5 LOC103036607 LOC103036607 mkrn2 mkrn2 Rb1 Rb1 LOC103022020 LOC103022020 polr3h polr3h Polr3a Polr3a POLR2E POLR2E W5LI45_ASTMX W5LI45_ASTMX cdk13 cdk13 rfx3 rfx3 LOC103029394 LOC103029394 W5LJI8_ASTMX W5LJI8_ASTMX ELOB ELOB polr2g polr2g gcc1 gcc1 ENSAMXP00000043297 ENSAMXP00000043297 ccnt2 ccnt2 gsx2 gsx2 nmi nmi ENSAMXP00000044352 ENSAMXP00000044352 LOC103030550 LOC103030550 ENSAMXP00000044772 ENSAMXP00000044772 Hltf Hltf ENSAMXP00000044959 ENSAMXP00000044959 polr3e polr3e LOC103030467 LOC103030467 fndc10 fndc10 ENSAMXP00000045626 ENSAMXP00000045626 atxn1l atxn1l LOC103024726 LOC103024726 taf7l taf7l tefm tefm Eloa Eloa LOC103044950 LOC103044950 ENSAMXP00000046363 ENSAMXP00000046363 gtf2h3 gtf2h3 gtf3c4 gtf3c4 ENSAMXP00000046815 ENSAMXP00000046815 elob elob taf10 taf10 ENSAMXP00000047443 ENSAMXP00000047443 ENSAMXP00000047536 ENSAMXP00000047536 taf2 taf2 ENSAMXP00000047894 ENSAMXP00000047894 ELOF1 ELOF1 topaz1 topaz1 hoxc9 hoxc9 polr3f polr3f ENSAMXP00000048308 ENSAMXP00000048308 ENSAMXP00000048343 ENSAMXP00000048343 elf3 elf3 LOC103028284 LOC103028284 ENSAMXP00000048556 ENSAMXP00000048556 ENSAMXP00000048876 ENSAMXP00000048876 ehf ehf ENSAMXP00000049677 ENSAMXP00000049677 pcid2 pcid2 cbfa2t3 cbfa2t3 LOC111193433 LOC111193433 ENSAMXP00000050157 ENSAMXP00000050157 supt6h supt6h LOC103046920 LOC103046920 Phrf1 Phrf1 Dr1 Dr1 ENSAMXP00000050895 ENSAMXP00000050895 ENSAMXP00000050954 ENSAMXP00000050954 ENSAMXP00000051148 ENSAMXP00000051148 drap1 drap1 taf1b taf1b lin9 lin9 LOC103032741 LOC103032741 polr3k polr3k ENSAMXP00000051962 ENSAMXP00000051962 Twistnb Twistnb ENSAMXP00000052057 ENSAMXP00000052057 LOC103039849 LOC103039849 gtf2h5 gtf2h5 cavin1 cavin1 tfam tfam gtf2h2c gtf2h2c ENSAMXP00000053049 ENSAMXP00000053049 LOC103030866 LOC103030866 ENSAMXP00000053345 ENSAMXP00000053345 nkx2-3 nkx2-3 snapc1 snapc1 LOC103046220 LOC103046220 ENSAMXP00000053637 ENSAMXP00000053637 LOC103041779 LOC103041779 ENSAMXP00000053866 ENSAMXP00000053866 med18 med18 polr2k polr2k ENSAMXP00000054367 ENSAMXP00000054367 mrpl12 mrpl12 nfatc2 nfatc2 Ubtf Ubtf pcf11 pcf11 lactbl1 lactbl1 W5KAI3_ASTMX W5KAI3_ASTMX Lipe Lipe pno1 pno1 ccnh ccnh W5L5A6_ASTMX W5L5A6_ASTMX SETX SETX LOC103046211 LOC103046211 W5L3I5_ASTMX W5L3I5_ASTMX W5L3E2_ASTMX W5L3E2_ASTMX RSF1 RSF1 ep300 ep300 W5K9N7_ASTMX W5K9N7_ASTMX POLR2B POLR2B ddx11 ddx11 hinfp hinfp TAF4 TAF4 rrn3 rrn3 wdr82 wdr82 Tcea2 Tcea2 W5K3P2_ASTMX W5K3P2_ASTMX Cdc73 Cdc73 polr2h polr2h polr3gl polr3gl Nfatc4 Nfatc4 mtf1 mtf1 W5K1S8_ASTMX W5K1S8_ASTMX W5K107_ASTMX W5K107_ASTMX W5K0L4_ASTMX W5K0L4_ASTMX W5K041_ASTMX W5K041_ASTMX ice2 ice2 W5JYC4_ASTMX W5JYC4_ASTMX W5JXX2_ASTMX W5JXX2_ASTMX ENSAMXP00000031013 ENSAMXP00000031013
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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ENSAMXP00000031886Small nuclear RNA activating complex, polypeptide 5. (119 aa)
ENSAMXP00000031926TAFH domain-containing protein. (965 aa)
PPP1R1BProtein phosphatase 1 regulatory inhibitor subunit 1B. (273 aa)
cdk12Cyclin-dependent kinase 12. (1311 aa)
LOC103033248Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (263 aa)
ice1KIAA0947-like (H. sapiens). (1623 aa)
LOC103040586Ets variant 5b. (531 aa)
ddx21DEAD (Asp-Glu-Ala-Asp) box helicase 21. (784 aa)
ssu72SSU72 homolog, RNA polymerase II CTD phosphatase. (194 aa)
setd2SET domain containing 2, histone lysine methyltransferase. (2886 aa)
plac8Placenta associated 8, tandem duplicate 1. (111 aa)
gtf2bGeneral transcription factor IIB. (222 aa)
gtf2a1General transcription factor IIA, 1. (390 aa)
Xbp1X-box binding protein 1. (264 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1801 aa)
mterf4Mitochondrial transcription termination factor 4. (338 aa)
Ccnt1Cyclin T1; Belongs to the cyclin family. (668 aa)
eny2Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (118 aa)
tceanc2Transcription elongation factor A (SII) N-terminal and central domain containing 2. (212 aa)
SRFSerum response factor. (527 aa)
LOC103025318NK2 homeobox 5. (313 aa)
ENSAMXP00000028486Mothers against decapentaplegic homolog. (493 aa)
gtf2e1General transcription factor IIE, polypeptide 1, alpha. (440 aa)
LOC103044020Lactamase, beta-like 1a. (604 aa)
ENSAMXP00000027930Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (78 aa)
LOC103026155Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Belongs to the ELL/occludin family. (530 aa)
ENSAMXP00000027652Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (928 aa)
LOC103029354Nuclear factor, interleukin 3 regulated, member 6. (415 aa)
LOC103029048BZIP domain-containing protein. (570 aa)
W5LTQ8_ASTMXNuclear factor, interleukin 3 regulated, member 4. (256 aa)
zbtb1Zinc finger and BTB domain containing 1. (680 aa)
taf13TATA-box binding protein associated factor 13. (124 aa)
LOC103029013Nuclear factor, interleukin 3 regulated, member 5. (591 aa)
LOC103029661Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
W5LS26_ASTMXSi:dkey-29b11.3. (152 aa)
Mterf2Mitochondrial transcription termination factor 2. (393 aa)
nfil3Nuclear factor, interleukin 3 regulated. (467 aa)
W5LRM9_ASTMXHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (101 aa)
LOC103042992General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (265 aa)
supt16hSPT16 homolog, facilitates chromatin remodeling subunit. (1031 aa)
Gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (288 aa)
prmt5Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (631 aa)
W5LP72_ASTMXRTF1 homolog, Paf1/RNA polymerase II complex component. (685 aa)
paf1PAF1 homolog, Paf1/RNA polymerase II complex component. (521 aa)
W5LNV2_ASTMXDEAH (Asp-Glu-Ala-His) box helicase 9. (442 aa)
LOC103040939BRF1 RNA polymerase III transcription initiation factor subunit a. (675 aa)
nr1h4Nuclear receptor subfamily 1, group H, member 4. (486 aa)
polr3bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1138 aa)
Gtf2a1lUncharacterized protein. (62 aa)
rbmxRNA binding motif protein X-linked. (384 aa)
LOC103031530TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor. (863 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
THAP1THAP domain containing 1. (242 aa)
brf1BRF1 RNA polymerase III transcription initiation factor subunit b. (719 aa)
ENSAMXP00000033395GATA binding protein 1a. (372 aa)
LOC103037830GATA binding protein 2a. (469 aa)
mlf1Myeloid leukemia factor 1. (267 aa)
supt3hSPT3 homolog, SAGA and STAGA complex component. (387 aa)
Gtf3c1B-block_TFIIIC domain-containing protein. (1095 aa)
MSX1Msh homeobox 1. (201 aa)
ENSAMXP00000034843Uncharacterized protein. (55 aa)
taf8TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (297 aa)
ENSAMXP00000035178Uncharacterized protein. (379 aa)
LOC103025922SANT domain-containing protein. (1148 aa)
gpbp1l1GC-rich promoter binding protein 1-like 1. (483 aa)
LOC103046486Uncharacterized protein. (2961 aa)
taf12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (162 aa)
LOC103043816RNA polymerase I and III subunit D. (138 aa)
LOC103023776Zgc:112083. (502 aa)
hoxb9Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (249 aa)
ENSAMXP00000037494Uncharacterized protein. (448 aa)
ENSAMXP00000037899MADS-box domain-containing protein. (356 aa)
brf2BRF2 RNA polymerase III transcription initiation factor subunit. (452 aa)
MYOCDMyocardin. (999 aa)
ENSAMXP00000038378Uncharacterized protein. (123 aa)
LOC103044436Transcription elongation factor A (SII), 3. (656 aa)
ENSAMXP00000038736Ets variant 7. (242 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
ENSAMXP00000039272Uncharacterized protein. (274 aa)
ENSAMXP00000039282DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (216 aa)
ENSAMXP00000039508PHD-type domain-containing protein. (643 aa)
CrcpCalcitonin gene-related peptide-receptor component protein. (146 aa)
polr1bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1133 aa)
xrn25'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (999 aa)
ELOB-2Elongin B. (114 aa)
ercc3Excision repair cross-complementation group 3. (781 aa)
ENSAMXP00000040725Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (99 aa)
TCEANCTranscription elongation factor A N-terminal and central domain containing. (335 aa)
gtf3c6General transcription factor IIIC, polypeptide 6, alpha. (197 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
Dhx9Helicase ATP-binding domain-containing protein. (83 aa)
ccdc124Coiled-coil domain containing 124. (215 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (621 aa)
snapc3Small nuclear RNA activating complex, polypeptide 3. (379 aa)
ENSAMXP00000041936Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
ENSAMXP00000041999Actin binding LIM protein family, member 2. (445 aa)
taf1aTATA box binding protein (TBP)-associated factor, RNA polymerase I, A. (565 aa)
W5L1C8_ASTMXUncharacterized protein. (350 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
W5KZQ7_ASTMXElongin A, like. (521 aa)
Ercc6Excision repair cross-complementation group 6. (1400 aa)
bcl9BCL9 transcription coactivator. (1594 aa)
LOC103023591Transmembrane protein 240a. (175 aa)
LOC103039831Upstream binding transcription factor, like. (720 aa)
LOC103043413Nuclear receptor subfamily 1, group H, member 5. (495 aa)
twnkTwinkle mtDNA helicase. (733 aa)
Dnmt1DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1478 aa)
polr1cRNA polymerase I and III subunit C. (348 aa)
Rpap1RNA polymerase II associated protein 1. (1389 aa)
Polr1aRNA_pol_Rpb1_1 domain-containing protein. (277 aa)
W5KWB2_ASTMXUncharacterized protein. (537 aa)
W5KW74_ASTMXSequestosome 1. (427 aa)
Runx1t1RUNX1 partner transcriptional co-repressor 1. (558 aa)
arAndrogen receptor. (839 aa)
taf11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (202 aa)
W5KU27_ASTMXTranscription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (541 aa)
LOC103046861Peroxisome proliferator-activated receptor gamma, coactivator 1 beta. (844 aa)
ctr9CTR9 homolog, Paf1/RNA polymerase II complex component. (1162 aa)
Scaf1SR-related CTD-associated factor 1. (1489 aa)
LOC103022779Ash1 (absent, small, or homeotic)-like (Drosophila). (2955 aa)
LOC103025545Actin binding Rho activating protein a. (354 aa)
ttf1Si:ch73-37h15.2. (740 aa)
W5KQI5_ASTMXLipase, hormone-sensitive a. (682 aa)
W5KPZ4_ASTMXGeneral transcription factor IIIC, polypeptide 3. (835 aa)
Tbx5T-box transcription factor 5a. (522 aa)
supt5hTranscription elongation factor SPT5. (1082 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (143 aa)
wdr61WD repeat domain 61. (305 aa)
LOC103025442LIM homeobox 1a. (405 aa)
ENSAMXP00000042638Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (97 aa)
prdm4PR domain containing 4. (830 aa)
LOC103029568Caveolae associated protein 1b. (455 aa)
etv1Ets variant 1. (476 aa)
fubp3Far upstream element (FUSE) binding protein 3. (574 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (547 aa)
LOC103022359Mothers against decapentaplegic homolog. (587 aa)
polrmtDNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1284 aa)
tcea1Transcription elongation factor A (SII), 1. (315 aa)
polr1eRNA polymerase I subunit E. (413 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (467 aa)
znrd1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (118 aa)
polr3cRNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (541 aa)
LOC103039714Si:dkey-208k4.2. (385 aa)
snapc4Small nuclear RNA activating complex, polypeptide 4. (1560 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
LOC103044365E1A binding protein p300 a. (2671 aa)
gtf2ird1GTF2I repeat domain containing 1. (976 aa)
W5KJ62_ASTMXSi:ch211-13k12.2. (555 aa)
W5KIT2_ASTMXActin binding LIM protein family, member 3. (550 aa)
W5KHS7_ASTMXSuppressor of cancer cell invasion. (552 aa)
sirt7Sirtuin 7. (407 aa)
ell2Elongation factor, RNA polymerase II, 2. (648 aa)
W5KGB2_ASTMXNuclear factor of activated T cells 5b. (1450 aa)
gcm2Glial cells missing transcription factor 2. (493 aa)
taf6lTAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (642 aa)
taf3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (909 aa)
ellElongation factor RNA polymerase II. (636 aa)
xab2XPA binding protein 2. (849 aa)
MarsMethionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (978 aa)
W5LD66_ASTMXMothers against decapentaplegic homolog. (573 aa)
Ino80Uncharacterized protein. (1028 aa)
W5LD23_ASTMXUncharacterized protein. (691 aa)
LOC103031807Uncharacterized protein. (427 aa)
MTERF1Mitochondrial transcription termination factor 1. (354 aa)
E2f1E2F transcription factor 1. (432 aa)
adrm1Adhesion regulating molecule 1. (414 aa)
W5LAU2_ASTMXTAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (804 aa)
Gtf3c5General transcription factor IIIC, polypeptide 5. (492 aa)
LOC103036607Bromo domain-containing protein. (1917 aa)
mkrn2Makorin, ring finger protein, 2. (413 aa)
Rb1Retinoblastoma 1. (882 aa)
LOC103022020Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (257 aa)
polr3hPolymerase (RNA) III (DNA directed) polypeptide H. (220 aa)
Polr3aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1346 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
W5LI45_ASTMXTumor necrosis factor receptor superfamily, member 1a. (398 aa)
cdk13Cyclin-dependent kinase 13. (1426 aa)
rfx3Regulatory factor X, 3 (influences HLA class II expression). (760 aa)
LOC103029394Mothers against decapentaplegic homolog. (544 aa)
W5LJI8_ASTMXZgc:171971. (361 aa)
ELOBElongin B. (114 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
gcc1GRIP and coiled-coil domain containing 1. (797 aa)
ENSAMXP00000043297Remodeling and spacing factor 1b, tandem duplicate 1. (1170 aa)
ccnt2Cyclin T2a; Belongs to the cyclin family. (704 aa)
gsx2GS homeobox 2. (260 aa)
nmiUncharacterized protein. (376 aa)
ENSAMXP00000044352Uncharacterized protein. (197 aa)
LOC103030550Nuclear factor of activated T cells 5a. (1452 aa)
ENSAMXP00000044772CBFD_NFYB_HMF domain-containing protein. (184 aa)
HltfHelicase-like transcription factor. (958 aa)
ENSAMXP00000044959ATRX chromatin remodeler, like. (1613 aa)
polr3ePolymerase (RNA) III (DNA directed) polypeptide E. (685 aa)
LOC103030467General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (255 aa)
fndc10Uncharacterized protein. (413 aa)
ENSAMXP00000045626Uncharacterized protein. (97 aa)
atxn1lAtaxin 1-like. (870 aa)
LOC103024726DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (620 aa)
taf7lTAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (427 aa)
tefmTranscription elongation factor, mitochondrial. (355 aa)
EloaElongin A. (190 aa)
LOC103044950Protein S100; Belongs to the S-100 family. (101 aa)
ENSAMXP00000046363Uncharacterized protein. (211 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (307 aa)
gtf3c4General transcription factor IIIC, polypeptide 4. (782 aa)
ENSAMXP00000046815Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
elobUbiquitin-like domain-containing protein. (119 aa)
taf10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (192 aa)
ENSAMXP00000047443Polymerase (RNA) III (DNA directed) polypeptide D. (476 aa)
ENSAMXP00000047536Nucleophosmin/nucleoplasmin, 3. (194 aa)
taf2TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1204 aa)
ENSAMXP00000047894Endothelin 1. (162 aa)
ELOF1Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
topaz1Testis and ovary specific PAZ domain containing 1. (1658 aa)
hoxc9Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (259 aa)
polr3fDNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (314 aa)
ENSAMXP00000048308Death inducer-obliterator 1. (1733 aa)
ENSAMXP00000048343Uncharacterized protein. (183 aa)
elf3E74-like factor 3 (ets domain transcription factor, epithelial-specific ). (367 aa)
LOC103028284Cyclin T2b; Belongs to the cyclin family. (608 aa)
ENSAMXP00000048556TATA box binding protein. (248 aa)
ENSAMXP00000048876Uncharacterized protein. (59 aa)
ehfEts homologous factor. (301 aa)
ENSAMXP00000049677PHD finger protein 3. (1704 aa)
pcid2PCI domain containing 2. (399 aa)
cbfa2t3CBFA2/RUNX1 partner transcriptional co-repressor 3. (708 aa)
LOC111193433Protein S100; Belongs to the S-100 family. (98 aa)
ENSAMXP00000050157Uncharacterized protein. (1647 aa)
supt6hTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1743 aa)
LOC103046920General transcription factor IIIAa. (555 aa)
Phrf1PHD and ring finger domains 1. (1568 aa)
Dr1Down-regulator of transcription 1. (179 aa)
ENSAMXP00000050895MNAT1 component of CDK activating kinase. (283 aa)
ENSAMXP00000050954Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (108 aa)
ENSAMXP00000051148Uncharacterized protein. (851 aa)
drap1DR1-associated protein 1 (negative cofactor 2 alpha). (228 aa)
taf1bTATA box binding protein (Tbp)-associated factor, RNA polymerase I, B. (617 aa)
lin9Lin-9 DREAM MuvB core complex component. (543 aa)
LOC103032741Actin binding Rho activating protein b. (373 aa)
polr3kDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
ENSAMXP00000051962LEO1 homolog, Paf1/RNA polymerase II complex component. (584 aa)
TwistnbTWIST neighbor. (330 aa)
ENSAMXP00000052057RNA polymerase II associated protein 2. (549 aa)
LOC103039849CD3e molecule, epsilon associated protein. (302 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
cavin1Caveolae associated protein 1a. (429 aa)
tfamTranscription factor A, mitochondrial. (309 aa)
gtf2h2cGeneral transcription factor IIH subunit. (393 aa)
ENSAMXP00000053049TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (710 aa)
LOC103030866TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (249 aa)
ENSAMXP00000053345MH1 domain-containing protein. (187 aa)
nkx2-3NK2 homeobox 3. (328 aa)
snapc1Small nuclear RNA activating complex, polypeptide 1b. (363 aa)
LOC103046220Thioredoxin_11 domain-containing protein. (619 aa)
ENSAMXP00000053637ELL domain-containing protein. (64 aa)
LOC103041779Protein phosphatase 1, regulatory (inhibitor) subunit 1B. (174 aa)
ENSAMXP00000053866Uncharacterized protein. (197 aa)
med18Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (208 aa)
polr2kUncharacterized protein. (109 aa)
ENSAMXP00000054367Transcription initiation factor TFIID subunit. (1854 aa)
mrpl12Mitochondrial ribosomal protein L12. (195 aa)
nfatc2Nuclear factor of activated T cells 2a. (902 aa)
UbtfUpstream binding transcription factor. (676 aa)
pcf11PCF11 cleavage and polyadenylation factor subunit. (1499 aa)
lactbl1Lactamase, beta-like 1b. (601 aa)
W5KAI3_ASTMXUncharacterized protein; Belongs to the DEAD box helicase family. (319 aa)
LipeLipase, hormone-sensitive b. (804 aa)
pno1Partner of NOB1 homolog. (238 aa)
ccnhCyclin H; Belongs to the cyclin family. (321 aa)
W5L5A6_ASTMXPolymerase (RNA) III (DNA directed) polypeptide G. (208 aa)
SETXSenataxin. (2327 aa)
LOC103046211V-ski avian sarcoma viral oncogene homolog a. (790 aa)
W5L3I5_ASTMXATRX chromatin remodeler. (1989 aa)
W5L3E2_ASTMXSANT domain-containing protein. (1042 aa)
RSF1Remodeling and spacing factor 1. (1379 aa)
ep300E1A binding protein p300 b. (2652 aa)
W5K9N7_ASTMXNuclear receptor coactivator 6. (2237 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1053 aa)
ddx11DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11. (902 aa)
hinfpHistone H4 transcription factor. (489 aa)
TAF4TATA-box binding protein associated factor 4. (839 aa)
rrn3RRN3 homolog, RNA polymerase I transcription factor. (610 aa)
wdr82WD repeat domain 82. (313 aa)
Tcea2Transcription elongation factor A (SII), 2. (318 aa)
W5K3P2_ASTMXHomeobox domain-containing protein. (152 aa)
Cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (530 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
polr3glPolymerase (RNA) III (DNA directed) polypeptide G like b. (216 aa)
Nfatc4Nuclear factor of activated T cells 4. (812 aa)
mtf1Metal-regulatory transcription factor 1. (773 aa)
W5K1S8_ASTMXSi:dkey-219c3.2. (1042 aa)
W5K107_ASTMXrRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (404 aa)
W5K0L4_ASTMXMADS-box domain-containing protein. (479 aa)
W5K041_ASTMXCBFA2/RUNX1 partner transcriptional co-repressor 2. (552 aa)
ice2Interactor of little elongator complex ELL subunit 2. (973 aa)
W5JYC4_ASTMXTATA box binding protein like 2. (313 aa)
W5JXX2_ASTMXUncharacterized protein. (125 aa)
ENSAMXP00000031013AAA domain-containing protein. (491 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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