STRINGSTRING
dscc1 dscc1 W5KX19_ASTMX W5KX19_ASTMX pds5a pds5a ENSAMXP00000037325 ENSAMXP00000037325 gpn2 gpn2 ENSAMXP00000041750 ENSAMXP00000041750 naa50 naa50 cdca5 cdca5 LOC103030832 LOC103030832 gpn3 gpn3 Chtf8 Chtf8 W5LK95_ASTMX W5LK95_ASTMX LOC103028128 LOC103028128 rad21 rad21 Esco1 Esco1 esco2 esco2 LOC103039334 LOC103039334 mau2 mau2 nipbl nipbl Rb1 Rb1 smc3 smc3 haspin haspin
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dscc1DNA replication and sister chromatid cohesion 1. (403 aa)
W5KX19_ASTMXPDS5 cohesin associated factor B. (1162 aa)
pds5aPDS5 cohesin associated factor A. (1413 aa)
ENSAMXP00000037325Pogo transposable element derived with ZNF domain b. (1910 aa)
gpn2GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (312 aa)
ENSAMXP00000041750Uncharacterized protein. (104 aa)
naa50N(alpha)-acetyltransferase 50, NatE catalytic subunit. (169 aa)
cdca5Cell division cycle associated 5. (260 aa)
LOC103030832RAD21 cohesin complex component like 1. (550 aa)
gpn3GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (285 aa)
Chtf8CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae). (145 aa)
W5LK95_ASTMXShugoshin 1. (609 aa)
LOC103028128Pogo transposable element derived with ZNF domain a. (1375 aa)
rad21RAD21 cohesin complex component b. (636 aa)
Esco1Acetyltransf_13 domain-containing protein. (216 aa)
esco2Establishment of sister chromatid cohesion N-acetyltransferase 2. (638 aa)
LOC103039334RAD21 cohesin complex component a. (637 aa)
mau2MAU2 sister chromatid cohesion factor. (598 aa)
nipblNipped-B protein. (2745 aa)
Rb1Retinoblastoma 1. (882 aa)
smc3Structural maintenance of chromosomes protein. (1217 aa)
haspinSi:dkeyp-26a9.2. (1225 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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