STRINGSTRING
LOC103030680 LOC103030680 LOC103034575 LOC103034575 W5KJA8_ASTMX W5KJA8_ASTMX W5KKM1_ASTMX W5KKM1_ASTMX zfr zfr LOC103035531 LOC103035531 amer2 amer2 LOC103046695 LOC103046695 ENSAMXP00000030482 ENSAMXP00000030482 CDH2 CDH2 ENSAMXP00000040707 ENSAMXP00000040707 LOC103025442 LOC103025442 LOC103036102 LOC103036102 nf2 nf2 ctnnb1 ctnnb1 ENSAMXP00000053361 ENSAMXP00000053361
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103030680Cadherin 2, type 1, N-cadherin (neuronal); Cadherins are calcium-dependent cell adhesion proteins. (898 aa)
LOC103034575Catenin, beta 2. (779 aa)
W5KJA8_ASTMXProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (402 aa)
W5KKM1_ASTMXUncharacterized protein. (638 aa)
zfrZinc finger RNA binding protein. (1053 aa)
LOC103035531Zinc finger RNA binding protein 2. (1007 aa)
amer2APC membrane recruitment protein 2. (652 aa)
LOC103046695Neurofibromin 2b (merlin). (587 aa)
ENSAMXP00000030482Uncharacterized protein. (600 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (903 aa)
ENSAMXP00000040707POU domain, class 5, transcription factor 3. (458 aa)
LOC103025442LIM homeobox 1a. (405 aa)
LOC103036102Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (354 aa)
nf2Neurofibromin 2a (merlin). (591 aa)
ctnnb1Catenin (cadherin-associated protein), beta 1. (790 aa)
ENSAMXP00000053361VPS52 subunit of GARP complex. (523 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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