STRINGSTRING
ENSAMXP00000051581 ENSAMXP00000051581 cftr cftr stau2 stau2 tgfb1 tgfb1 LOC103024607 LOC103024607 W5LBU5_ASTMX W5LBU5_ASTMX LOC103031423 LOC103031423 NANOS1 NANOS1 pum3 pum3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSAMXP00000051581Nanos homolog 1; Belongs to the nanos family. (183 aa)
cftrCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1486 aa)
stau2Staufen double-stranded RNA binding protein 2. (674 aa)
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
LOC103024607Transforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
W5LBU5_ASTMXStaufen double-stranded RNA binding protein 1. (566 aa)
LOC103031423DND microRNA-mediated repression inhibitor 1. (405 aa)
NANOS1Nanos C2HC-type zinc finger 1; Belongs to the nanos family. (184 aa)
pum3Pumilio RNA-binding family member 3. (630 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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