48 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W5L1S1_ASTMX	Lysine (K)-specific demethylase 6A, like. (1314 aa)
	W5K0L4_ASTMX	MADS-box domain-containing protein. (479 aa)
	W5K4M9_ASTMX	Lysine (K)-specific demethylase 6A. (1252 aa)
	W5K7J1_ASTMX	Methenyltetrahydrofolate synthetase domain containing. (404 aa)
	tdrd7	Tudor domain containing 7 a. (1075 aa)
	W5KE90_ASTMX	Cactin. (706 aa)
	LOC103022868	RAP1A, member of RAS oncogene family b. (185 aa)
	tdrd6	Tudor domain containing 6. (2191 aa)
	W5KST7_ASTMX	Dharma. (158 aa)
	gsc	Goosecoid. (236 aa)
	W5KUF8_ASTMX	Tudor domain containing 7 b. (1092 aa)
	chrd	Chordin; Belongs to the chordin family. (945 aa)
	tdrd1	Tudor domain containing 1. (1165 aa)
	LOC103032451	Transcription activation suppressor b. (1909 aa)
	W5LD66_ASTMX	Mothers against decapentaplegic homolog. (573 aa)
	Tdrd5	Uncharacterized protein. (932 aa)
	LOC103022359	Mothers against decapentaplegic homolog. (587 aa)
	LOC103029394	Mothers against decapentaplegic homolog. (544 aa)
	krit1	KRIT1 ankyrin repeat containing. (741 aa)
	Tdrd15	Si:dkeyp-93d12.1. (1813 aa)
	LOC103043286	Forkhead box H1. (533 aa)
	wls	Wnt ligand secretion mediator. (542 aa)
	ENSAMXP00000028486	Mothers against decapentaplegic homolog. (493 aa)
	SRF	Serum response factor. (527 aa)
	ENSAMXP00000030308	Homeobox domain-containing protein. (240 aa)
	LOC103027511	Si:ch211-189e2.3. (1548 aa)
	cdx4	Caudal type homeobox 4. (271 aa)
	Fam208a	Uncharacterized protein. (994 aa)
	ENSAMXP00000033200	Homeobox domain-containing protein. (289 aa)
	ENSAMXP00000035098	Uncharacterized protein. (560 aa)
	ccm2	CCM2 scaffold protein. (456 aa)
	tdrkh	Tudor and KH domain containing. (940 aa)
	ENSAMXP00000037899	MADS-box domain-containing protein. (356 aa)
	ddit3	DNA-damage-inducible transcript 3. (280 aa)
	dctn2	Dynactin 2 (p50). (403 aa)
	LOC103025442	LIM homeobox 1a. (405 aa)
	LOC103044781	Caudal type homeobox 1 b. (263 aa)
	rap1b	RAP1B, member of RAS oncogene family. (184 aa)
	TMED2	Transmembrane p24 trafficking protein 2. (210 aa)
	Ripply1	Ripply transcriptional repressor 1. (176 aa)
	Fam76b	Family with sequence similarity 76 member B. (329 aa)
	LOC111194998	Transmembrane p24 trafficking protein 2. (202 aa)
	LOC107197240	BHLH domain-containing protein. (244 aa)
	LOC103040938	Phospholipase D family, member 6. (233 aa)
	pgap1	GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins. GPI inositol deacylation may important for efficient transport of GPI- anchored proteins from the endoplasmic reticulum to the Golgi. (940 aa)
	ENSAMXP00000053345	MH1 domain-containing protein. (187 aa)
	LOC103024676	Bucky ball. (653 aa)
	rap1a	RAP1A, member of RAS oncogene family a. (195 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000028486	LOC103043286	ENSAMXP00000028486	ENSAMXP00000028165	Mothers against decapentaplegic homolog.	Forkhead box H1.	0.644
ENSAMXP00000053345	LOC103043286	ENSAMXP00000053345	ENSAMXP00000028165	MH1 domain-containing protein.	Forkhead box H1.	0.644
LOC103022359	LOC103029394	ENSAMXP00000018891	ENSAMXP00000019787	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC103022359	LOC103043286	ENSAMXP00000018891	ENSAMXP00000028165	Mothers against decapentaplegic homolog.	Forkhead box H1.	0.644
LOC103022359	W5LD66_ASTMX	ENSAMXP00000018891	ENSAMXP00000017778	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC103022868	krit1	ENSAMXP00000009338	ENSAMXP00000021635	RAP1A, member of RAS oncogene family b.	KRIT1 ankyrin repeat containing.	0.723
LOC103022868	rap1b	ENSAMXP00000009338	ENSAMXP00000044062	RAP1A, member of RAS oncogene family b.	RAP1B, member of RAS oncogene family.	0.900
LOC103027511	tdrkh	ENSAMXP00000030645	ENSAMXP00000037605	Si:ch211-189e2.3.	Tudor and KH domain containing.	0.548
LOC103029394	LOC103022359	ENSAMXP00000019787	ENSAMXP00000018891	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC103029394	LOC103043286	ENSAMXP00000019787	ENSAMXP00000028165	Mothers against decapentaplegic homolog.	Forkhead box H1.	0.644
LOC103029394	W5LD66_ASTMX	ENSAMXP00000019787	ENSAMXP00000017778	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC103040938	Tdrd5	ENSAMXP00000050228	ENSAMXP00000018384	Phospholipase D family, member 6.	Uncharacterized protein.	0.581
LOC103040938	W5KUF8_ASTMX	ENSAMXP00000050228	ENSAMXP00000011220	Phospholipase D family, member 6.	Tudor domain containing 7 b.	0.477
LOC103040938	tdrd1	ENSAMXP00000050228	ENSAMXP00000015817	Phospholipase D family, member 6.	Tudor domain containing 1.	0.584
LOC103040938	tdrd7	ENSAMXP00000050228	ENSAMXP00000004255	Phospholipase D family, member 6.	Tudor domain containing 7 a.	0.477
LOC103040938	tdrkh	ENSAMXP00000050228	ENSAMXP00000037605	Phospholipase D family, member 6.	Tudor and KH domain containing.	0.587
LOC103043286	ENSAMXP00000028486	ENSAMXP00000028165	ENSAMXP00000028486	Forkhead box H1.	Mothers against decapentaplegic homolog.	0.644
LOC103043286	ENSAMXP00000053345	ENSAMXP00000028165	ENSAMXP00000053345	Forkhead box H1.	MH1 domain-containing protein.	0.644
LOC103043286	LOC103022359	ENSAMXP00000028165	ENSAMXP00000018891	Forkhead box H1.	Mothers against decapentaplegic homolog.	0.644
LOC103043286	LOC103029394	ENSAMXP00000028165	ENSAMXP00000019787	Forkhead box H1.	Mothers against decapentaplegic homolog.	0.644