23 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	serpine1	Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family. (401 aa)
	ENSAMXP00000034795	Cystatin F. (143 aa)
	LOC103028218	Golgi glycoprotein 1a. (1152 aa)
	serpine2	Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2; Belongs to the serpin family. (400 aa)
	LOC103046319	SERPIN domain-containing protein; Belongs to the serpin family. (459 aa)
	W5LTE5_ASTMX	Uncharacterized protein. (271 aa)
	W5LTD2_ASTMX	Growth arrest-specific 1a. (246 aa)
	W5LNL5_ASTMX	Uncharacterized protein. (271 aa)
	Lrrk2	Leucine-rich repeat kinase 2. (2537 aa)
	W5KU03_ASTMX	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (288 aa)
	LOC103043694	Uncharacterized protein. (465 aa)
	serpinf2	SERPIN domain-containing protein; Belongs to the serpin family. (470 aa)
	ctsz	Cathepsin Z; Belongs to the peptidase C1 family. (302 aa)
	LOC103033117	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (302 aa)
	LOC103038759	Golgi glycoprotein 1b. (1147 aa)
	chac1	Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. (206 aa)
	ENSAMXP00000054535	Uncharacterized protein. (299 aa)
	ENSAMXP00000050201	Pept_C1 domain-containing protein. (228 aa)
	ENSAMXP00000049650	Cystatin F. (168 aa)
	Bcl2l12	Uncharacterized protein. (177 aa)
	ENSAMXP00000043364	Protein phosphatase 1, regulatory subunit 15A. (325 aa)
	ENSAMXP00000041681	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (273 aa)
	tmem98	Transmembrane protein 98. (222 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103028218	LOC103038759	ENSAMXP00000033088	ENSAMXP00000048509	Golgi glycoprotein 1a.	Golgi glycoprotein 1b.	0.900
LOC103038759	LOC103028218	ENSAMXP00000048509	ENSAMXP00000033088	Golgi glycoprotein 1b.	Golgi glycoprotein 1a.	0.900
W5LNL5_ASTMX	W5LTD2_ASTMX	ENSAMXP00000021427	ENSAMXP00000026343	Uncharacterized protein.	Growth arrest-specific 1a.	0.905
W5LNL5_ASTMX	W5LTE5_ASTMX	ENSAMXP00000021427	ENSAMXP00000026357	Uncharacterized protein.	Uncharacterized protein.	0.907
W5LTD2_ASTMX	W5LNL5_ASTMX	ENSAMXP00000026343	ENSAMXP00000021427	Growth arrest-specific 1a.	Uncharacterized protein.	0.905
W5LTD2_ASTMX	W5LTE5_ASTMX	ENSAMXP00000026343	ENSAMXP00000026357	Growth arrest-specific 1a.	Uncharacterized protein.	0.903
W5LTE5_ASTMX	W5LNL5_ASTMX	ENSAMXP00000026357	ENSAMXP00000021427	Uncharacterized protein.	Uncharacterized protein.	0.907
W5LTE5_ASTMX	W5LTD2_ASTMX	ENSAMXP00000026357	ENSAMXP00000026343	Uncharacterized protein.	Growth arrest-specific 1a.	0.903
serpine1	serpine2	ENSAMXP00000039350	ENSAMXP00000031841	Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family.	Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2; Belongs to the serpin family.	0.656
serpine2	serpine1	ENSAMXP00000031841	ENSAMXP00000039350	Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2; Belongs to the serpin family.	Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family.	0.656