STRINGSTRING
smo smo ENSAMXP00000051555 ENSAMXP00000051555 LOC103030863 LOC103030863 CCN3 CCN3 Aamp Aamp W5KT32_ASTMX W5KT32_ASTMX akirin1 akirin1 W5KIR0_ASTMX W5KIR0_ASTMX W5KGH6_ASTMX W5KGH6_ASTMX Itgb1bp1 Itgb1bp1 ddit3 ddit3 vangl2 vangl2 LOC103033735 LOC103033735 LOC103042121 LOC103042121 gdf11 gdf11
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (840 aa)
ENSAMXP00000051555Plasminogen activator, tissue. (601 aa)
LOC103030863Uncharacterized protein. (437 aa)
CCN3Cellular communication network factor 3. (344 aa)
AampAngio-associated, migratory cell protein. (377 aa)
W5KT32_ASTMXNeurofibromin 1a. (2744 aa)
akirin1Akirin 1. (190 aa)
W5KIR0_ASTMXBridging integrator 3. (244 aa)
W5KGH6_ASTMXNeurofibromin 1b. (2733 aa)
Itgb1bp1Integrin beta 1 binding protein 1. (184 aa)
ddit3DNA-damage-inducible transcript 3. (280 aa)
vangl2Vang-like protein. (524 aa)
LOC103033735Plasminogen activator, urokinase a; Belongs to the peptidase S1 family. (420 aa)
LOC103042121Pleckstrin homology domain containing, family O member 1b. (397 aa)
gdf11Growth differentiation factor 11. (409 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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