68 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103041753	Si:dkeyp-115e12.6. (1816 aa)
	smc3	Structural maintenance of chromosomes protein. (1217 aa)
	DGKQ	Diacylglycerol kinase. (911 aa)
	LOC103038298	AXH domain-containing protein. (603 aa)
	satb2	DNA-binding protein SATB. (869 aa)
	xpot	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (972 aa)
	Chmp1a	Charged multivesicular body protein 1A. (201 aa)
	W5LH77_ASTMX	Uncharacterized protein. (311 aa)
	rad21	RAD21 cohesin complex component b. (636 aa)
	fign	Fidgetin; Belongs to the AAA ATPase family. (753 aa)
	W5LTE8_ASTMX	IF rod domain-containing protein; Belongs to the intermediate filament family. (527 aa)
	LOC103047478	Prohibitin. (303 aa)
	LOC103047533	Cofilin 1; Belongs to the actin-binding proteins ADF family. (192 aa)
	ENSAMXP00000029484	Uncharacterized protein. (176 aa)
	Cask	Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family. (886 aa)
	LOC103035142	Prohibitin. (340 aa)
	LOC103039334	RAD21 cohesin complex component a. (637 aa)
	ercc8	Excision repair cross-complementation group 8. (400 aa)
	GFI1B	Growth factor independent 1B transcriptional repressor. (334 aa)
	LOC103037932	DNA (cytosine-5-)-methyltransferase 3 beta, duplicate b.2; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1347 aa)
	maea	Macrophage erythroblast attacher. (397 aa)
	LOC103035866	DNA (cytosine-5-)-methyltransferase 3 beta, duplicate a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1514 aa)
	LOC103029611	Ataxin 1b. (855 aa)
	kin	Kin17 DNA and RNA binding protein. (389 aa)
	LOC111195425	AXH domain-containing protein. (512 aa)
	ENSAMXP00000038848	NMDA receptor synaptonuclear signaling and neuronal migration factor a. (585 aa)
	ENSAMXP00000040278	PRP40 pre-mRNA processing factor 40 homolog A. (797 aa)
	Ahctf1	AT hook containing transcription factor 1. (1865 aa)
	LOC103039316	Proteasome subunit alpha type. (246 aa)
	Gse1	Gse1 coiled-coil protein. (1956 aa)
	LOC103033229	Proteasome subunit alpha type. (246 aa)
	nono	Non-POU domain containing, octamer-binding. (445 aa)
	LOC103028167	Growth factor independent 1A transcription repressor b. (379 aa)
	phf5a	PHD finger protein 5A. (115 aa)
	ENSAMXP00000045999	Ataxin 1a. (761 aa)
	ENSAMXP00000047983	NMDA receptor synaptonuclear signaling and neuronal migration factor b. (577 aa)
	psma6	Proteasome subunit alpha type. (246 aa)
	LOC103041493	Zgc:158846; Belongs to the intermediate filament family. (474 aa)
	ENSAMXP00000051420	Uncharacterized protein; Belongs to the AKAP95 family. (417 aa)
	satb1	SATB homeobox 1b. (856 aa)
	Numa1	Uncharacterized protein. (2188 aa)
	LOC103036301	Paraspeckle component 1. (530 aa)
	LOC103042429	Keratin 8; Belongs to the intermediate filament family. (526 aa)
	cfl2	Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family. (166 aa)
	ogg1	8-oxoguanine DNA glycosylase. (390 aa)
	LOC103032894	C2H2-type domain-containing protein. (594 aa)
	morc2	MORC family CW-type zinc finger 2. (1036 aa)
	W5L5M7_ASTMX	THO complex 1. (613 aa)
	W5L9Q8_ASTMX	Heterogeneous nuclear ribonucleoprotein M. (676 aa)
	LOC103028330	CXXC finger protein 1a. (573 aa)
	blm	BLM RecQ like helicase. (1418 aa)
	TENM1	Teneurin transmembrane protein 1. (2670 aa)
	W5L1R1_ASTMX	Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family. (854 aa)
	nufip1	C2H2-type domain-containing protein. (671 aa)
	LOC103030832	RAD21 cohesin complex component like 1. (550 aa)
	dcaf7	DDB1 and CUL4 associated factor 7. (342 aa)
	LOC103038471	Splicing factor proline/glutamine-rich. (656 aa)
	hat1	Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. (408 aa)
	W5KTR9_ASTMX	Uncharacterized protein. (1029 aa)
	LOC103036455	Matrin 3-like 1.1. (1115 aa)
	snw1	SNW domain containing 1. (539 aa)
	hlcs	Holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase). (903 aa)
	W5KK76_ASTMX	DNA polymerase. (1376 aa)
	W5KJ59_ASTMX	Uncharacterized protein. (690 aa)
	LOC103038186	Teneurin transmembrane protein 1. (2718 aa)
	GFI1	Growth factor independent 1 transcriptional repressor. (312 aa)
	men1	Multiple endocrine neoplasia I. (623 aa)
	LOC103045901	CXXC finger protein 1b. (562 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cask	ENSAMXP00000029484	ENSAMXP00000029864	ENSAMXP00000029484	Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.	Uncharacterized protein.	0.458
Cask	ENSAMXP00000040278	ENSAMXP00000029864	ENSAMXP00000040278	Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.	PRP40 pre-mRNA processing factor 40 homolog A.	0.458
Cask	W5L1R1_ASTMX	ENSAMXP00000029864	ENSAMXP00000013773	Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.	Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.	0.785
Chmp1a	fign	ENSAMXP00000018667	ENSAMXP00000026258	Charged multivesicular body protein 1A.	Fidgetin; Belongs to the AAA ATPase family.	0.450
ENSAMXP00000029484	Cask	ENSAMXP00000029484	ENSAMXP00000029864	Uncharacterized protein.	Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.	0.458
ENSAMXP00000029484	W5L1R1_ASTMX	ENSAMXP00000029484	ENSAMXP00000013773	Uncharacterized protein.	Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.	0.458
ENSAMXP00000040278	Cask	ENSAMXP00000040278	ENSAMXP00000029864	PRP40 pre-mRNA processing factor 40 homolog A.	Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.	0.458
ENSAMXP00000040278	W5L1R1_ASTMX	ENSAMXP00000040278	ENSAMXP00000013773	PRP40 pre-mRNA processing factor 40 homolog A.	Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.	0.458
LOC103030832	LOC103039334	ENSAMXP00000013363	ENSAMXP00000032739	RAD21 cohesin complex component like 1.	RAD21 cohesin complex component a.	0.903
LOC103030832	W5KK76_ASTMX	ENSAMXP00000013363	ENSAMXP00000007988	RAD21 cohesin complex component like 1.	DNA polymerase.	0.462
LOC103030832	rad21	ENSAMXP00000013363	ENSAMXP00000021316	RAD21 cohesin complex component like 1.	RAD21 cohesin complex component b.	0.903
LOC103030832	smc3	ENSAMXP00000013363	ENSAMXP00000004591	RAD21 cohesin complex component like 1.	Structural maintenance of chromosomes protein.	0.995
LOC103033229	LOC103039316	ENSAMXP00000043914	ENSAMXP00000042882	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.901
LOC103033229	psma6	ENSAMXP00000043914	ENSAMXP00000049278	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.901
LOC103036301	W5L9Q8_ASTMX	ENSAMXP00000053298	ENSAMXP00000016570	Paraspeckle component 1.	Heterogeneous nuclear ribonucleoprotein M.	0.577
LOC103036455	W5L9Q8_ASTMX	ENSAMXP00000010972	ENSAMXP00000016570	Matrin 3-like 1.1.	Heterogeneous nuclear ribonucleoprotein M.	0.535
LOC103036455	nono	ENSAMXP00000010972	ENSAMXP00000043977	Matrin 3-like 1.1.	Non-POU domain containing, octamer-binding.	0.468
LOC103038471	W5L9Q8_ASTMX	ENSAMXP00000011854	ENSAMXP00000016570	Splicing factor proline/glutamine-rich.	Heterogeneous nuclear ribonucleoprotein M.	0.577
LOC103039316	LOC103033229	ENSAMXP00000042882	ENSAMXP00000043914	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.901
LOC103039316	psma6	ENSAMXP00000042882	ENSAMXP00000049278	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.900