STRINGSTRING
LOC103043405 LOC103043405 LOC103027441 LOC103027441 LOC103041009 LOC103041009 LOC103031445 LOC103031445 W5KGH6_ASTMX W5KGH6_ASTMX Adgrb3 Adgrb3 LOC103043091 LOC103043091 W5KT32_ASTMX W5KT32_ASTMX W5L1S8_ASTMX W5L1S8_ASTMX VASH1 VASH1 ROCK1 ROCK1 CNMD CNMD LOC103041169 LOC103041169 sars1 sars1 W5LNI4_ASTMX W5LNI4_ASTMX krit1 krit1 S1pr1 S1pr1 cldn5 cldn5 ENSAMXP00000027904 ENSAMXP00000027904 thbs2 thbs2 ENSAMXP00000029792 ENSAMXP00000029792 sirt2 sirt2 vash2 vash2 LOC103042500 LOC103042500 ENSAMXP00000037958 ENSAMXP00000037958 LOC103042784 LOC103042784 ENSAMXP00000039289 ENSAMXP00000039289 serpine1 serpine1 rgcc rgcc LOC103029638 LOC103029638 ENSAMXP00000042872 ENSAMXP00000042872 Hgs Hgs LOC103047654 LOC103047654 ENSAMXP00000043794 ENSAMXP00000043794 Wisp3 Wisp3 ENSAMXP00000044530 ENSAMXP00000044530 LOC111190962 LOC111190962 Tnmd Tnmd ENSAMXP00000046111 ENSAMXP00000046111 mecp2 mecp2 tbc1d31 tbc1d31 ENSAMXP00000049202 ENSAMXP00000049202 apoh apoh Thbs1 Thbs1 LOC103042476 LOC103042476 efna3 efna3 gadd45a gadd45a Adgrb2 Adgrb2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103043405Chondromodulin. (373 aa)
LOC103027441Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family. (266 aa)
LOC103041009Tumor necrosis factor b (TNF superfamily, member 2). (247 aa)
LOC103031445Thrombospondin 1b. (1178 aa)
W5KGH6_ASTMXNeurofibromin 1b. (2733 aa)
Adgrb3Adhesion G protein-coupled receptor B3; Belongs to the G-protein coupled receptor 2 family. (1527 aa)
LOC103043091Elastin microfibril interfacer 1a. (1050 aa)
W5KT32_ASTMXNeurofibromin 1a. (2744 aa)
W5L1S8_ASTMXAdhesion G protein-coupled receptor B1a; Belongs to the G-protein coupled receptor 2 family. (1518 aa)
VASH1Vasohibin 1. (395 aa)
ROCK1Rho-associated, coiled-coil containing protein kinase 1; Belongs to the protein kinase superfamily. (407 aa)
CNMDChondromodulin. (403 aa)
LOC103041169YjeF N-terminal domain containing 3. (246 aa)
sars1Seryl-tRNA synthetase. (520 aa)
W5LNI4_ASTMXAdhesion G protein-coupled receptor B1b. (612 aa)
krit1KRIT1 ankyrin repeat containing. (741 aa)
S1pr1Sphingosine-1-phosphate receptor 1; Belongs to the G-protein coupled receptor 1 family. (376 aa)
cldn5Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (215 aa)
ENSAMXP00000027904Uncharacterized protein. (337 aa)
thbs2Thrombospondin 2b. (1182 aa)
ENSAMXP00000029792Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (215 aa)
sirt2NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (387 aa)
vash2Vasohibin 2. (376 aa)
LOC103042500Ephrin-A3a; Belongs to the ephrin family. (224 aa)
ENSAMXP00000037958GAIN domain-containing protein. (240 aa)
LOC103042784Rho-associated, coiled-coil containing protein kinase 2a; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1459 aa)
ENSAMXP00000039289G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor 2 family. (295 aa)
serpine1Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family. (401 aa)
rgccRegulator of cell cycle. (128 aa)
LOC103029638Growth arrest and DNA-damage-inducible, alpha, a. (163 aa)
ENSAMXP00000042872Uncharacterized protein. (98 aa)
HgsHepatocyte growth factor-regulated tyrosine kinase substrate. (688 aa)
LOC103047654YjeF N-terminal domain-containing protein. (247 aa)
ENSAMXP00000043794Uncharacterized protein. (375 aa)
Wisp3Cellular communication network factor 6. (325 aa)
ENSAMXP00000044530Elastin microfibril interfacer 1b. (992 aa)
LOC111190962Interleukin 17a/f1. (147 aa)
TnmdTenomodulin. (277 aa)
ENSAMXP00000046111Phorbol-ester/DAG-type domain-containing protein. (143 aa)
mecp2Methyl CpG binding protein 2. (612 aa)
tbc1d31TBC1 domain family, member 31. (1083 aa)
ENSAMXP00000049202Uncharacterized protein. (298 aa)
apohApolipoprotein H. (351 aa)
Thbs1Thrombospondin 1a. (1133 aa)
LOC103042476Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
efna3Ephrin RBD domain-containing protein; Belongs to the ephrin family. (246 aa)
gadd45aGrowth arrest and DNA-damage-inducible, alpha, b. (159 aa)
Adgrb2Uncharacterized protein. (564 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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