STRINGSTRING
LOC103043104 LOC103043104 dct dct hps1 hps1 W5K581_ASTMX W5K581_ASTMX kit kit rnf41 rnf41 dicer1 dicer1 LOC103047839 LOC103047839 Csf1r Csf1r W5LQG8_ASTMX W5LQG8_ASTMX LOC103027103 LOC103027103 cited1 cited1 LOC103043510 LOC103043510 Hps6 Hps6 tfap2e tfap2e hps4 hps4 Mib1 Mib1 ENSAMXP00000040119 ENSAMXP00000040119 Slc24a5 Slc24a5 Bloc1s6 Bloc1s6 Lrmda Lrmda ENSAMXP00000047138 ENSAMXP00000047138 oca2 oca2 ENSAMXP00000051577 ENSAMXP00000051577 ENSAMXP00000051962 ENSAMXP00000051962
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103043104Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family. (444 aa)
dctDopachrome tautomerase. (518 aa)
hps1HPS1 biogenesis of lysosomal organelles complex 3 subunit 1. (672 aa)
W5K581_ASTMXPresenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (436 aa)
kitMast/stem cell growth factor receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (974 aa)
rnf41Ring finger protein 41. (201 aa)
dicer1Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily. (1870 aa)
LOC103047839Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (460 aa)
Csf1rColony stimulating factor 1 receptor, a; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (972 aa)
W5LQG8_ASTMXTyrosinase related protein 1. (479 aa)
LOC103027103Tyrosinase-related protein 1b. (526 aa)
cited1Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1. (155 aa)
LOC103043510G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (421 aa)
Hps6Uncharacterized protein. (775 aa)
tfap2eTranscription factor AP-2 epsilon. (426 aa)
hps4HPS4 biogenesis of lysosomal organelles complex 3 subunit 2. (661 aa)
Mib1Mindbomb E3 ubiquitin protein ligase 1. (1027 aa)
ENSAMXP00000040119Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family. (404 aa)
Slc24a5Na_Ca_ex domain-containing protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (112 aa)
Bloc1s6Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin. (158 aa)
LrmdaUncharacterized protein. (54 aa)
ENSAMXP00000047138Leucine rich melanocyte differentiation associated. (247 aa)
oca2CitMHS domain-containing protein. (857 aa)
ENSAMXP00000051577Solute carrier family 24 member 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (399 aa)
ENSAMXP00000051962LEO1 homolog, Paf1/RNA polymerase II complex component. (584 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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