STRINGSTRING
LOC103047028 LOC103047028 LOC103021996 LOC103021996 W5LHB3_ASTMX W5LHB3_ASTMX vps35 vps35 ift27 ift27 Ssx2ip Ssx2ip W5LCJ8_ASTMX W5LCJ8_ASTMX W5LBU5_ASTMX W5LBU5_ASTMX LOC103027336 LOC103027336 RELN RELN nmd3 nmd3 IFT43 IFT43 LOC103047239 LOC103047239 LOC103024095 LOC103024095 dzip1 dzip1 ttc21a ttc21a LOC103032139 LOC103032139 LOC103021592 LOC103021592 ift172 ift172 ssna1 ssna1 W5KWV5_ASTMX W5KWV5_ASTMX W5KVG0_ASTMX W5KVG0_ASTMX wdr34 wdr34 ttc21b ttc21b W5KSB7_ASTMX W5KSB7_ASTMX exoc3 exoc3 ICK ICK pcm1 pcm1 NSG1 NSG1 Lsg1 Lsg1 nup88 nup88 mak mak LOC103025011 LOC103025011 lrrc1 lrrc1 kif17 kif17 W5K6T9_ASTMX W5K6T9_ASTMX W5K6I2_ASTMX W5K6I2_ASTMX W5K6B4_ASTMX W5K6B4_ASTMX W5K308_ASTMX W5K308_ASTMX W5K2Y5_ASTMX W5K2Y5_ASTMX stau2 stau2 W5JXY3_ASTMX W5JXY3_ASTMX ift74 ift74 ENSAMXP00000054563 ENSAMXP00000054563 grip2 grip2 ENSAMXP00000053765 ENSAMXP00000053765 nop9 nop9 ran ran ENSAMXP00000053030 ENSAMXP00000053030 ABCE1 ABCE1 ENSAMXP00000052107 ENSAMXP00000052107 traf3ip1 traf3ip1 LOC103032064 LOC103032064 ENSAMXP00000050613 ENSAMXP00000050613 ift88 ift88 ENSAMXP00000050043 ENSAMXP00000050043 LOC103039857 LOC103039857 RPGR RPGR ENSAMXP00000048891 ENSAMXP00000048891 lmnb2 lmnb2 LOC103029856 LOC103029856 ENSAMXP00000046984 ENSAMXP00000046984 LOC103021716 LOC103021716 ift46 ift46 ENSAMXP00000046158 ENSAMXP00000046158 LOC103039925 LOC103039925 ENSAMXP00000045910 ENSAMXP00000045910 neto1 neto1 lgi1 lgi1 eif6 eif6 ENSAMXP00000044916 ENSAMXP00000044916 exoc3l2 exoc3l2 gphn gphn LOC103046931 LOC103046931 LOC103038215 LOC103038215 ENSAMXP00000043377 ENSAMXP00000043377 LOC103022608 LOC103022608 Gripap1 Gripap1 LOC103047251 LOC103047251 ttc26 ttc26 LOC103046444 LOC103046444 lca5 lca5 LOC103035078 LOC103035078 ift52 ift52 LOC103023040 LOC103023040 hspb11 hspb11 Kif5b Kif5b Tctex1d2 Tctex1d2 ift140 ift140 LOC103042828 LOC103042828 mzt1 mzt1 AKIRIN2 AKIRIN2 cacng4 cacng4 Sdad1 Sdad1 snapin snapin LOC103042184 LOC103042184 ENSAMXP00000034700 ENSAMXP00000034700 ift20 ift20 IFT122 IFT122 lmnb1 lmnb1 KIF5A KIF5A Rrs1 Rrs1 ENSAMXP00000032725 ENSAMXP00000032725 Wdr60 Wdr60 LOC103026867 LOC103026867 Wdr19 Wdr19 ENSAMXP00000029353 ENSAMXP00000029353 anks1b anks1b Ift81 Ift81 ENSAMXP00000028776 ENSAMXP00000028776 LOC107197383 LOC107197383 LOC103038528 LOC103038528 klhl21 klhl21 Bbs12 Bbs12 W5LRD2_ASTMX W5LRD2_ASTMX shisa4 shisa4 W5LPP4_ASTMX W5LPP4_ASTMX cep72 cep72
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103047028Lamin L3; Belongs to the intermediate filament family. (605 aa)
LOC103021996Tumor necrosis factor, alpha-induced protein 2a. (674 aa)
W5LHB3_ASTMXLamin A; Belongs to the intermediate filament family. (550 aa)
vps35Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (796 aa)
ift27Intraflagellar transport 27 homolog (Chlamydomonas). (186 aa)
Ssx2ipSynovial sarcoma, X breakpoint 2 interacting protein b. (461 aa)
W5LCJ8_ASTMXIntraflagellar transport 57 homolog (Chlamydomonas). (389 aa)
W5LBU5_ASTMXStaufen double-stranded RNA binding protein 1. (566 aa)
LOC103027336Calcium channel, voltage-dependent, gamma subunit 8b. (416 aa)
RELNReelin. (3447 aa)
nmd360S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (504 aa)
IFT43Intraflagellar transport 43. (186 aa)
LOC103047239Akirin 2. (179 aa)
LOC103024095Leucine-rich, glioma inactivated 1a. (546 aa)
dzip1C2H2-type domain-containing protein. (903 aa)
ttc21aTetratricopeptide repeat domain 21A. (1314 aa)
LOC103032139Exocyst complex component 3-like 1. (785 aa)
LOC103021592Exportin 1 (CRM1 homolog, yeast) b. (1071 aa)
ift172Intraflagellar transport 172. (1749 aa)
ssna1Sjogren syndrome nuclear autoantigen 1. (113 aa)
W5KWV5_ASTMXMolybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released. (735 aa)
W5KVG0_ASTMXGlutamate receptor interacting protein 1. (1057 aa)
wdr34WD repeat domain 34. (497 aa)
ttc21bTetratricopeptide repeat domain 21B. (1320 aa)
W5KSB7_ASTMXNucleophosmin 1a. (259 aa)
exoc3Exocyst complex component 3. (746 aa)
ICKIntestinal cell kinase. (635 aa)
pcm1Pericentriolar material 1. (2032 aa)
NSG1Neuronal vesicle trafficking associated 1. (172 aa)
Lsg1Large 60S subunit nuclear export GTPase 1. (641 aa)
nup88Nucleoporin 88. (744 aa)
makMale germ cell-associated kinase. (625 aa)
LOC103025011ATP-binding cassette, sub-family E (OABP), member 1. (599 aa)
lrrc1Leucine rich repeat containing 1. (662 aa)
kif17Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (805 aa)
W5K6T9_ASTMXLTV1 ribosome biogenesis factor. (443 aa)
W5K6I2_ASTMXDynein, cytoplasmic 2, light intermediate chain 1. (333 aa)
W5K6B4_ASTMXExportin 1 (CRM1 homolog, yeast) a. (943 aa)
W5K308_ASTMXExocyst complex component 3-like 4. (625 aa)
W5K2Y5_ASTMXTumor necrosis factor, alpha-induced protein 2b. (458 aa)
stau2Staufen double-stranded RNA binding protein 2. (674 aa)
W5JXY3_ASTMXDiscs, large homolog 3 (Drosophila); Belongs to the MAGUK family. (862 aa)
ift74Intraflagellar transport 74. (599 aa)
ENSAMXP00000054563Fleer. (691 aa)
grip2Glutamate receptor interacting protein 2b. (1124 aa)
ENSAMXP00000053765Uncharacterized protein. (232 aa)
nop9Uncharacterized protein. (614 aa)
ranGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (215 aa)
ENSAMXP00000053030Uncharacterized protein. (265 aa)
ABCE1ATP binding cassette subfamily E member 1. (614 aa)
ENSAMXP00000052107Tumor necrosis factor, alpha-induced protein 2a. (547 aa)
traf3ip1TNF receptor-associated factor 3 interacting protein 1. (660 aa)
LOC103032064Uncharacterized protein; Belongs to the MAGUK family. (930 aa)
ENSAMXP00000050613Uncharacterized protein. (85 aa)
ift88Intraflagellar transport 88 homolog. (857 aa)
ENSAMXP00000050043Centrosomal protein 112. (826 aa)
LOC103039857Calcyon neuron-specific vesicular protein. (188 aa)
RPGRUncharacterized protein. (723 aa)
ENSAMXP00000048891Discs, large homolog 4b (Drosophila); Belongs to the MAGUK family. (698 aa)
lmnb2Lamin B2; Belongs to the intermediate filament family. (582 aa)
LOC103029856Voltage-dependent calcium channel gamma-2 subunit; Regulates the trafficking and gating properties of AMPA- selective glutamate receptors (AMPARs). Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization. Does not show subunit-specific AMPA receptor regulation and regulates all AMPAR subunits. Thought to stabilize the calcium channel in an inactivated (closed) state; Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily. (324 aa)
ENSAMXP00000046984Discs, large homolog 2 (Drosophila). (929 aa)
LOC103021716Discs, large homolog 1 (Drosophila); Belongs to the MAGUK family. (935 aa)
ift46Intraflagellar transport 46 homolog (Chlamydomonas). (356 aa)
ENSAMXP00000046158Si:dkey-208b23.5. (732 aa)
LOC103039925Voltage-dependent calcium channel gamma-2 subunit; Regulates the trafficking and gating properties of AMPA- selective glutamate receptors (AMPARs). Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization. Does not show subunit-specific AMPA receptor regulation and regulates all AMPAR subunits. Thought to stabilize the calcium channel in an inactivated (closed) state; Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily. (335 aa)
ENSAMXP00000045910Discs, large homolog 4a (Drosophila); Belongs to the MAGUK family. (654 aa)
neto1Neuropilin (NRP) and tolloid (TLL)-like 1, like. (540 aa)
lgi1Leucine-rich, glioma inactivated 1b. (547 aa)
eif6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
ENSAMXP00000044916Centrosomal protein 131. (1090 aa)
exoc3l2Exocyst complex component 3-like 2b. (868 aa)
gphnGephyrin b. (796 aa)
LOC103046931Neurofilament, medium polypeptide a; Belongs to the intermediate filament family. (914 aa)
LOC103038215Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (978 aa)
ENSAMXP00000043377Glutamate receptor interacting protein 2a. (1001 aa)
LOC103022608Calcium channel, voltage-dependent, gamma subunit 8a. (433 aa)
Gripap1GRIP1 associated protein 1. (863 aa)
LOC103047251Calcium channel, voltage-dependent, gamma subunit 3b. (309 aa)
ttc26Tetratricopeptide repeat domain 26. (557 aa)
LOC103046444Nucleophosmin 1b. (297 aa)
lca5Lebercilin LCA5. (785 aa)
LOC103035078Leucine-rich repeat LGI family, member 2b. (534 aa)
ift52Intraflagellar transport 52 homolog (Chlamydomonas). (435 aa)
LOC103023040Neuronal pentraxin 2a. (450 aa)
hspb11Zgc:158640. (171 aa)
Kif5bKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (912 aa)
Tctex1d2Tctex1 domain containing 2. (145 aa)
ift140Intraflagellar transport 140 homolog (Chlamydomonas). (1257 aa)
LOC103042828Exocyst complex component 3-like 2a. (930 aa)
mzt1Mitotic spindle organizing protein 1. (75 aa)
AKIRIN2Akirin 2. (221 aa)
cacng4Voltage-dependent calcium channel gamma-4 subunit; Regulates the activity of L-type calcium channels that contain CACNA1C as pore-forming subunit (By similarity). Regulates the trafficking and gating properties of AMPA-selective glutamate receptors (AMPARs), including GRIA1 and GRIA4. Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization and by mediating their resensitization; Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily. (322 aa)
Sdad1SDA1 domain containing 1. (1003 aa)
snapinSNAP associated protein. (129 aa)
LOC103042184Voltage-dependent calcium channel gamma-4 subunit; Regulates the activity of L-type calcium channels that contain CACNA1C as pore-forming subunit (By similarity). Regulates the trafficking and gating properties of AMPA-selective glutamate receptors (AMPARs), including GRIA1 and GRIA4. Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization and by mediating their resensitization; Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily. (335 aa)
ENSAMXP00000034700Voltage-dependent calcium channel gamma-7 subunit; Regulates the activity of L-type calcium channels that contain CACNA1C as pore-forming subunit (By similarity). Regulates the trafficking and gating properties of AMPA-selective glutamate receptors (AMPARs). Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization and by mediating their resensitization. Shows specificity only for GRIA1 and GRIA2. Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily. (341 aa)
ift20Intraflagellar transport 20 homolog (Chlamydomonas). (132 aa)
IFT122Intraflagellar transport 122. (1145 aa)
lmnb1Lamin B1; Belongs to the intermediate filament family. (600 aa)
KIF5AKinesin family member 5A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1035 aa)
Rrs1Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (384 aa)
ENSAMXP00000032725Uncharacterized protein. (269 aa)
Wdr60WD repeat domain 60. (717 aa)
LOC103026867Retinitis pigmentosa GTPase regulator b. (1513 aa)
Wdr19WD repeat domain 19. (1339 aa)
ENSAMXP00000029353Scribble planar cell polarity protein. (1804 aa)
anks1bAnkyrin repeat and sterile alpha motif domain containing 1B. (1337 aa)
Ift81Intraflagellar transport 81 homolog. (670 aa)
ENSAMXP00000028776Voltage-dependent calcium channel gamma-7 subunit; Regulates the activity of L-type calcium channels that contain CACNA1C as pore-forming subunit (By similarity). Regulates the trafficking and gating properties of AMPA-selective glutamate receptors (AMPARs). Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization and by mediating their resensitization. Shows specificity only for GRIA1 and GRIA2. Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily. (310 aa)
LOC107197383Nucleophosmin/nucleoplasmin, 2b. (189 aa)
LOC103038528Neuropilin (NRP) and tolloid (TLL)-like 1. (531 aa)
klhl21Kelch-like family member 21. (616 aa)
Bbs12Bardet-Biedl syndrome 12. (655 aa)
W5LRD2_ASTMXImportin 9. (1026 aa)
shisa4Shisa family member 4. (201 aa)
W5LPP4_ASTMXWD repeat-containing protein 35. (1139 aa)
cep72Centrosomal protein 72. (533 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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