24 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC111194997	Interleukin-1. (276 aa)
	tgfb1	Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
	LOC103034269	Uncharacterized protein. (474 aa)
	LOC103041009	Tumor necrosis factor b (TNF superfamily, member 2). (247 aa)
	LOC103038271	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (309 aa)
	LOC103024607	Transforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
	malt1	MALT paracaspase 1. (803 aa)
	Cd180	CD180 molecule. (653 aa)
	W5LC84_ASTMX	MALT paracaspase 3. (577 aa)
	LOC103040508	MALT paracaspase 2. (794 aa)
	LOC103032028	Interferon regulatory factor 3. (455 aa)
	ENSAMXP00000027926	Scavenger receptor class B, member 1; Belongs to the CD36 family. (480 aa)
	LOC103032524	Uncharacterized protein. (514 aa)
	nfkbia	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b. (326 aa)
	Mtdh	Metadherin a. (511 aa)
	Ptafr	Platelet-activating factor receptor; Belongs to the G-protein coupled receptor 1 family. (380 aa)
	LOC103039990	TIR domain-containing protein. (783 aa)
	ENSAMXP00000043438	TIR domain-containing protein. (689 aa)
	irak1	Interleukin-1 receptor-associated kinase 1. (708 aa)
	ENSAMXP00000046425	Interleukin-1. (252 aa)
	Bcl10	BCL10 immune signaling adaptor. (239 aa)
	LOC111195965	TIR domain-containing protein. (848 aa)
	tgfb2	Transforming growth factor beta; Belongs to the TGF-beta family. (401 aa)
	RIPK2	Receptor interacting serine/threonine kinase 2. (579 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bcl10	LOC103038271	ENSAMXP00000050153	ENSAMXP00000009765	BCL10 immune signaling adaptor.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	0.577
Bcl10	LOC103040508	ENSAMXP00000050153	ENSAMXP00000018694	BCL10 immune signaling adaptor.	MALT paracaspase 2.	0.996
Bcl10	RIPK2	ENSAMXP00000050153	ENSAMXP00000053355	BCL10 immune signaling adaptor.	Receptor interacting serine/threonine kinase 2.	0.533
Bcl10	W5LC84_ASTMX	ENSAMXP00000050153	ENSAMXP00000017446	BCL10 immune signaling adaptor.	MALT paracaspase 3.	0.996
Bcl10	malt1	ENSAMXP00000050153	ENSAMXP00000016513	BCL10 immune signaling adaptor.	MALT paracaspase 1.	0.996
Bcl10	nfkbia	ENSAMXP00000050153	ENSAMXP00000032727	BCL10 immune signaling adaptor.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.577
Cd180	ENSAMXP00000043438	ENSAMXP00000017173	ENSAMXP00000043438	CD180 molecule.	TIR domain-containing protein.	0.503
Cd180	LOC103039990	ENSAMXP00000017173	ENSAMXP00000036055	CD180 molecule.	TIR domain-containing protein.	0.500
Cd180	LOC111195965	ENSAMXP00000017173	ENSAMXP00000050783	CD180 molecule.	TIR domain-containing protein.	0.507
ENSAMXP00000027926	ENSAMXP00000043438	ENSAMXP00000027926	ENSAMXP00000043438	Scavenger receptor class B, member 1; Belongs to the CD36 family.	TIR domain-containing protein.	0.635
ENSAMXP00000027926	LOC103039990	ENSAMXP00000027926	ENSAMXP00000036055	Scavenger receptor class B, member 1; Belongs to the CD36 family.	TIR domain-containing protein.	0.635
ENSAMXP00000027926	LOC103041009	ENSAMXP00000027926	ENSAMXP00000005247	Scavenger receptor class B, member 1; Belongs to the CD36 family.	Tumor necrosis factor b (TNF superfamily, member 2).	0.419
ENSAMXP00000027926	LOC111195965	ENSAMXP00000027926	ENSAMXP00000050783	Scavenger receptor class B, member 1; Belongs to the CD36 family.	TIR domain-containing protein.	0.635
ENSAMXP00000043438	Cd180	ENSAMXP00000043438	ENSAMXP00000017173	TIR domain-containing protein.	CD180 molecule.	0.503
ENSAMXP00000043438	ENSAMXP00000027926	ENSAMXP00000043438	ENSAMXP00000027926	TIR domain-containing protein.	Scavenger receptor class B, member 1; Belongs to the CD36 family.	0.635
ENSAMXP00000043438	LOC103032028	ENSAMXP00000043438	ENSAMXP00000021858	TIR domain-containing protein.	Interferon regulatory factor 3.	0.624
ENSAMXP00000043438	LOC103034269	ENSAMXP00000043438	ENSAMXP00000003127	TIR domain-containing protein.	Uncharacterized protein.	0.498
ENSAMXP00000043438	LOC103041009	ENSAMXP00000043438	ENSAMXP00000005247	TIR domain-containing protein.	Tumor necrosis factor b (TNF superfamily, member 2).	0.443
ENSAMXP00000043438	RIPK2	ENSAMXP00000043438	ENSAMXP00000053355	TIR domain-containing protein.	Receptor interacting serine/threonine kinase 2.	0.475
ENSAMXP00000043438	irak1	ENSAMXP00000043438	ENSAMXP00000044383	TIR domain-containing protein.	Interleukin-1 receptor-associated kinase 1.	0.621