22 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	stam	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1. (518 aa)
	ptpn23	Protein tyrosine phosphatase, non-receptor type 23, a. (1981 aa)
	LEPROTL1	Leptin receptor overlapping transcript like 1. (130 aa)
	vta1	Vesicle (multivesicular body) trafficking 1. (306 aa)
	LOC103039392	Charged multivesicular body protein 6b. (207 aa)
	W5LSE8_ASTMX	Protein tyrosine phosphatase, non-receptor type 23, b. (1128 aa)
	W5LRY3_ASTMX	Uncharacterized protein. (222 aa)
	LOC103031885	Charged multivesicular body protein 5a. (219 aa)
	vps36	Vacuolar protein sorting 36 homolog. (382 aa)
	chmp7	Charged multivesicular body protein 7. (444 aa)
	W5K993_ASTMX	Transmembrane protein 50A. (149 aa)
	ENSAMXP00000052193	Charged multivesicular body protein 4C. (236 aa)
	chmp5	Charged multivesicular body protein 5b. (220 aa)
	vps25	Vacuolar protein sorting 25 homolog. (174 aa)
	vps28	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (223 aa)
	snf8	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (258 aa)
	LOC103026801	Charged multivesicular body protein 4Bb. (221 aa)
	ENSAMXP00000036673	Uncharacterized protein. (112 aa)
	LOC103028714	Charged multivesicular body protein 6a. (204 aa)
	tmem50a	Transmembrane protein 50A. (160 aa)
	LOC103043292	Charged multivesicular body protein 4Ba. (222 aa)
	LEPROT	Leptin receptor overlapping transcript. (131 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000036673	ENSAMXP00000052193	ENSAMXP00000036673	ENSAMXP00000052193	Uncharacterized protein.	Charged multivesicular body protein 4C.	0.826
ENSAMXP00000036673	LOC103026801	ENSAMXP00000036673	ENSAMXP00000035778	Uncharacterized protein.	Charged multivesicular body protein 4Bb.	0.791
ENSAMXP00000036673	LOC103028714	ENSAMXP00000036673	ENSAMXP00000038127	Uncharacterized protein.	Charged multivesicular body protein 6a.	0.652
ENSAMXP00000036673	LOC103039392	ENSAMXP00000036673	ENSAMXP00000027923	Uncharacterized protein.	Charged multivesicular body protein 6b.	0.652
ENSAMXP00000036673	LOC103043292	ENSAMXP00000036673	ENSAMXP00000041136	Uncharacterized protein.	Charged multivesicular body protein 4Ba.	0.791
ENSAMXP00000036673	W5LSE8_ASTMX	ENSAMXP00000036673	ENSAMXP00000025853	Uncharacterized protein.	Protein tyrosine phosphatase, non-receptor type 23, b.	0.442
ENSAMXP00000036673	chmp7	ENSAMXP00000036673	ENSAMXP00000015954	Uncharacterized protein.	Charged multivesicular body protein 7.	0.662
ENSAMXP00000036673	ptpn23	ENSAMXP00000036673	ENSAMXP00000034850	Uncharacterized protein.	Protein tyrosine phosphatase, non-receptor type 23, a.	0.442
ENSAMXP00000036673	vps25	ENSAMXP00000036673	ENSAMXP00000048983	Uncharacterized protein.	Vacuolar protein sorting 25 homolog.	0.418
ENSAMXP00000036673	vps28	ENSAMXP00000036673	ENSAMXP00000042531	Uncharacterized protein.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.469
ENSAMXP00000036673	vps36	ENSAMXP00000036673	ENSAMXP00000016126	Uncharacterized protein.	Vacuolar protein sorting 36 homolog.	0.418
ENSAMXP00000036673	vta1	ENSAMXP00000036673	ENSAMXP00000028603	Uncharacterized protein.	Vesicle (multivesicular body) trafficking 1.	0.943
ENSAMXP00000052193	ENSAMXP00000036673	ENSAMXP00000052193	ENSAMXP00000036673	Charged multivesicular body protein 4C.	Uncharacterized protein.	0.826
ENSAMXP00000052193	LOC103028714	ENSAMXP00000052193	ENSAMXP00000038127	Charged multivesicular body protein 4C.	Charged multivesicular body protein 6a.	0.885
ENSAMXP00000052193	LOC103031885	ENSAMXP00000052193	ENSAMXP00000018732	Charged multivesicular body protein 4C.	Charged multivesicular body protein 5a.	0.827
ENSAMXP00000052193	LOC103039392	ENSAMXP00000052193	ENSAMXP00000027923	Charged multivesicular body protein 4C.	Charged multivesicular body protein 6b.	0.885
ENSAMXP00000052193	W5LRY3_ASTMX	ENSAMXP00000052193	ENSAMXP00000025676	Charged multivesicular body protein 4C.	Uncharacterized protein.	0.830
ENSAMXP00000052193	W5LSE8_ASTMX	ENSAMXP00000052193	ENSAMXP00000025853	Charged multivesicular body protein 4C.	Protein tyrosine phosphatase, non-receptor type 23, b.	0.907
ENSAMXP00000052193	chmp5	ENSAMXP00000052193	ENSAMXP00000005958	Charged multivesicular body protein 4C.	Charged multivesicular body protein 5b.	0.828
ENSAMXP00000052193	chmp7	ENSAMXP00000052193	ENSAMXP00000015954	Charged multivesicular body protein 4C.	Charged multivesicular body protein 7.	0.859