STRINGSTRING
Ripply1 Ripply1 W5K4M9_ASTMX W5K4M9_ASTMX LOC103022868 LOC103022868 W5L1S1_ASTMX W5L1S1_ASTMX W5LD66_ASTMX W5LD66_ASTMX LOC103022359 LOC103022359 LOC103029394 LOC103029394 LOC103043286 LOC103043286 ENSAMXP00000028486 ENSAMXP00000028486 rap1b rap1b TMED2 TMED2 LOC111194998 LOC111194998 LOC107197240 LOC107197240 ENSAMXP00000053345 ENSAMXP00000053345 rap1a rap1a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ripply1Ripply transcriptional repressor 1. (176 aa)
W5K4M9_ASTMXLysine (K)-specific demethylase 6A. (1252 aa)
LOC103022868RAP1A, member of RAS oncogene family b. (185 aa)
W5L1S1_ASTMXLysine (K)-specific demethylase 6A, like. (1314 aa)
W5LD66_ASTMXMothers against decapentaplegic homolog. (573 aa)
LOC103022359Mothers against decapentaplegic homolog. (587 aa)
LOC103029394Mothers against decapentaplegic homolog. (544 aa)
LOC103043286Forkhead box H1. (533 aa)
ENSAMXP00000028486Mothers against decapentaplegic homolog. (493 aa)
rap1bRAP1B, member of RAS oncogene family. (184 aa)
TMED2Transmembrane p24 trafficking protein 2. (210 aa)
LOC111194998Transmembrane p24 trafficking protein 2. (202 aa)
LOC107197240BHLH domain-containing protein. (244 aa)
ENSAMXP00000053345MH1 domain-containing protein. (187 aa)
rap1aRAP1A, member of RAS oncogene family a. (195 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.