STRINGSTRING
gabra6 gabra6 kcnc4 kcnc4 Atp6ap2 Atp6ap2 gabra4 gabra4 LOC103038026 LOC103038026 gabra5 gabra5 W5L1H7_ASTMX W5L1H7_ASTMX W5L9N9_ASTMX W5L9N9_ASTMX kcnc1 kcnc1 LOC103035315 LOC103035315 Gper1 Gper1 ENSAMXP00000027309 ENSAMXP00000027309 LAMP5 LAMP5 LOC103025423 LOC103025423 ENSAMXP00000028791 ENSAMXP00000028791 LOC103026962 LOC103026962 ENSAMXP00000032677 ENSAMXP00000032677 LOC103033058 LOC103033058 LOC103030489 LOC103030489 ENSAMXP00000037322 ENSAMXP00000037322 gabrg1 gabrg1 LOC103031495 LOC103031495 LOC103030391 LOC103030391 ENSAMXP00000042408 ENSAMXP00000042408 GABRG3 GABRG3 LOC103026478 LOC103026478 gabrg2 gabrg2 Shisa6 Shisa6 ENSAMXP00000050086 ENSAMXP00000050086 dagla dagla
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gabra6Gamma-aminobutyric acid (GABA) A receptor, alpha 6a; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (436 aa)
kcnc4BTB domain-containing protein; Belongs to the potassium channel family. (625 aa)
Atp6ap2ATPase H+ transporting accessory protein 2. (330 aa)
gabra4Gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (561 aa)
LOC103038026Potassium voltage-gated channel, Shaw-related subfamily, member 1a; Belongs to the potassium channel family. (598 aa)
gabra5Gamma-aminobutyric acid (GABA) A receptor, alpha 5; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (460 aa)
W5L1H7_ASTMXPotassium voltage-gated channel, Shaw-related subfamily, member 2; Belongs to the potassium channel family. (560 aa)
W5L9N9_ASTMXShisa family member 7a. (370 aa)
kcnc1Potassium voltage-gated channel, Shaw-related subfamily, member 1b; Belongs to the potassium channel family. (597 aa)
LOC103035315Uncharacterized protein. (411 aa)
Gper1G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family. (405 aa)
ENSAMXP00000027309Shisa family member 8b. (426 aa)
LAMP5Lysosomal associated membrane protein family member 5. (286 aa)
LOC103025423Shisa family member 7. (643 aa)
ENSAMXP00000028791ATPase H+ transporting accessory protein 2. (152 aa)
LOC103026962Gamma-aminobutyric acid (GABA) A receptor, alpha 1; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (457 aa)
ENSAMXP00000032677Reverse transcriptase domain-containing protein. (428 aa)
LOC103033058Gamma-aminobutyric acid type A receptor alpha2 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (455 aa)
LOC103030489Potassium voltage-gated channel, Shaw-related subfamily, member 3b; Belongs to the potassium channel family. (656 aa)
ENSAMXP00000037322Potassium voltage-gated channel, Shaw-related subfamily, member 3a; Belongs to the potassium channel family. (779 aa)
gabrg1Gamma-aminobutyric acid type A receptor gamma1 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (453 aa)
LOC103031495Gamma-aminobutyric acid (GABA) A receptor, alpha 3; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (513 aa)
LOC103030391Gamma-aminobutyric acid type A receptor alpha2 subunit a; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (451 aa)
ENSAMXP00000042408Shisa family member 9b. (403 aa)
GABRG3Gamma-aminobutyric acid type A receptor gamma3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (512 aa)
LOC103026478Gamma-aminobutyric acid (GABA) A receptor, alpha 6b; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (443 aa)
gabrg2Gamma-aminobutyric acid (GABA) A receptor, gamma 2; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (470 aa)
Shisa6Uncharacterized protein. (138 aa)
ENSAMXP00000050086Uncharacterized protein. (328 aa)
daglaDiacylglycerol lipase, alpha. (1125 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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