STRINGSTRING
tgfb3 tgfb3 tgfb1 tgfb1 serpinf2 serpinf2 LOC103024607 LOC103024607 LOC103043091 LOC103043091 W5KX06_ASTMX W5KX06_ASTMX LOC103042034 LOC103042034 pkd2 pkd2 f2 f2 LOC103046319 LOC103046319 errfi1 errfi1 ENSAMXP00000035483 ENSAMXP00000035483 larp6 larp6 rgcc rgcc F2R F2R ENSAMXP00000041345 ENSAMXP00000041345 f2r f2r ENSAMXP00000044530 ENSAMXP00000044530 ucn ucn LOC103023834 LOC103023834 Suco Suco
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (409 aa)
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
serpinf2SERPIN domain-containing protein; Belongs to the serpin family. (470 aa)
LOC103024607Transforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
LOC103043091Elastin microfibril interfacer 1a. (1050 aa)
W5KX06_ASTMXSUN domain-containing protein. (1472 aa)
LOC103042034La ribonucleoprotein domain family, member 6b. (530 aa)
pkd2Polycystic kidney disease 2. (903 aa)
f2Coagulation factor II (thrombin); Belongs to the peptidase S1 family. (619 aa)
LOC103046319SERPIN domain-containing protein; Belongs to the serpin family. (459 aa)
errfi1ERBB receptor feedback inhibitor 1a. (480 aa)
ENSAMXP00000035483G_PROTEIN_RECEP_F1_2 domain-containing protein. (355 aa)
larp6La ribonucleoprotein domain family, member 6a. (652 aa)
rgccRegulator of cell cycle. (128 aa)
F2RG_PROTEIN_RECEP_F1_2 domain-containing protein. (471 aa)
ENSAMXP00000041345Uncharacterized protein. (184 aa)
f2rCoagulation factor II (thrombin) receptor. (414 aa)
ENSAMXP00000044530Elastin microfibril interfacer 1b. (992 aa)
ucnUrotensin 1. (207 aa)
LOC103023834HTH La-type RNA-binding domain-containing protein. (438 aa)
SucoUncharacterized protein. (551 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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