STRINGSTRING
rcn1 rcn1 manf manf LOC103036265 LOC103036265 LOC103027690 LOC103027690 Hsp90b1 Hsp90b1 calu calu W5LG65_ASTMX W5LG65_ASTMX LOC103026931 LOC103026931 CASQ2 CASQ2 SRL SRL LOC103024078 LOC103024078
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rcn1Reticulocalbin 1, EF-hand calcium binding domain. (321 aa)
manfMesencephalic astrocyte-derived neurotrophic factor. (180 aa)
LOC103036265Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. (414 aa)
LOC103027690Calumenin b. (315 aa)
Hsp90b1Heat shock protein 90, beta (grp94), member 1. (793 aa)
caluCalumenin a. (315 aa)
W5LG65_ASTMXCalsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. (352 aa)
LOC103026931Sarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (522 aa)
CASQ2Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. (414 aa)
SRLSarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (598 aa)
LOC103024078Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. (443 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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