STRINGSTRING
lrrc45 lrrc45 LOC103041901 LOC103041901 W5K7M8_ASTMX W5K7M8_ASTMX ret ret LOC103031148 LOC103031148 LOC103039629 LOC103039629 LOC103043830 LOC103043830 W5KTL1_ASTMX W5KTL1_ASTMX LOC103032744 LOC103032744 Nexmif Nexmif W5LTC8_ASTMX W5LTC8_ASTMX Tesc Tesc LOC103036816 LOC103036816 LOC103041350 LOC103041350 Itgb1bp1 Itgb1bp1 serpine1 serpine1 cib1 cib1 ENSAMXP00000041912 ENSAMXP00000041912 Crkl Crkl crk crk LOC111191686 LOC111191686 ptpn11 ptpn11 ift74 ift74 LOC103042476 LOC103042476 LOC103021450 LOC103021450 CRK CRK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lrrc45Leucine rich repeat containing 45. (674 aa)
LOC103041901Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (274 aa)
W5K7M8_ASTMXUncharacterized protein. (997 aa)
retProto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. (1113 aa)
LOC103031148Src kinase associated phosphoprotein 1. (378 aa)
LOC103039629Im:7154036. (647 aa)
LOC103043830Ephrin-A1a; Belongs to the ephrin family. (224 aa)
W5KTL1_ASTMXProtein tyrosine phosphatase non-receptor type 6. (563 aa)
LOC103032744Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (593 aa)
NexmifNeurite extension and migration factor b. (1251 aa)
W5LTC8_ASTMXCytochrome P450, family 1, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (523 aa)
TescTescalcin a. (203 aa)
LOC103036816Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (526 aa)
LOC103041350Fermitin family member 3b. (640 aa)
Itgb1bp1Integrin beta 1 binding protein 1. (184 aa)
serpine1Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family. (401 aa)
cib1Calcium and integrin binding 1 (calmyrin). (190 aa)
ENSAMXP00000041912Tescalcin b. (217 aa)
CrklV-crk avian sarcoma virus CT10 oncogene homolog-like. (312 aa)
crkV-crk avian sarcoma virus CT10 oncogene homolog. (307 aa)
LOC111191686Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (275 aa)
ptpn11Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (594 aa)
ift74Intraflagellar transport 74. (599 aa)
LOC103042476Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
LOC103021450Ephrin-A1b; Belongs to the ephrin family. (233 aa)
CRKCRK proto-oncogene, adaptor protein. (315 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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