STRINGSTRING
Frem3 Frem3 LOC103032217 LOC103032217 sall4 sall4 Bax Bax ALX3 ALX3 ENSAMXP00000053345 ENSAMXP00000053345 LOC103033621 LOC103033621 pkdcc pkdcc ENSAMXP00000050565 ENSAMXP00000050565 LOC103037976 LOC103037976 bcl2l11 bcl2l11 tbx3 tbx3 sp8 sp8 ENSAMXP00000044959 ENSAMXP00000044959 lef1 lef1 W5K9M8_ASTMX W5K9M8_ASTMX map3k20 map3k20 Wdpcp Wdpcp ift52 ift52 en1 en1 ift140 ift140 LOC103046407 LOC103046407 sema3c sema3c ENSAMXP00000037031 ENSAMXP00000037031 etv4 etv4 fbxw4 fbxw4 ENSAMXP00000035369 ENSAMXP00000035369 MSX1 MSX1 LOC103032320 LOC103032320 Wdr19 Wdr19 fgf4 fgf4 LOC103024953 LOC103024953 med1 med1 tbx4 tbx4 ENSAMXP00000028486 ENSAMXP00000028486 W5LU02_ASTMX W5LU02_ASTMX fras1 fras1 W5LL88_ASTMX W5LL88_ASTMX LOC103029394 LOC103029394 sall1 sall1 LOC103022359 LOC103022359 dkk1 dkk1 rpgrip1l rpgrip1l W5LD66_ASTMX W5LD66_ASTMX Sp9 Sp9 W5L3I5_ASTMX W5L3I5_ASTMX W5L115_ASTMX W5L115_ASTMX LOC103045402 LOC103045402 LOC103024223 LOC103024223 LOC103032831 LOC103032831 Tbx5 Tbx5 W5KN49_ASTMX W5KN49_ASTMX LOC103047816 LOC103047816 W5KIU0_ASTMX W5KIU0_ASTMX
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Frem3Fras1 related extracellular matrix 3. (3111 aa)
LOC103032217Dickkopf_N domain-containing protein. (277 aa)
sall4Spalt-like transcription factor 4. (1107 aa)
BaxBCL2 associated X, apoptosis regulator a. (190 aa)
ALX3ALX homeobox 3. (359 aa)
ENSAMXP00000053345MH1 domain-containing protein. (187 aa)
LOC103033621Spalt-like transcription factor 1b. (1301 aa)
pkdccProtein kinase domain containing, cytoplasmic a. (476 aa)
ENSAMXP00000050565Dickkopf WNT signaling pathway inhibitor 1a. (277 aa)
LOC103037976Homeobox protein engrailed-like. (286 aa)
bcl2l11Bclx_interact domain-containing protein. (203 aa)
tbx3T-box transcription factor 3a. (706 aa)
sp8Sp8 transcription factor a. (459 aa)
ENSAMXP00000044959ATRX chromatin remodeler, like. (1613 aa)
lef1Lymphoid enhancer-binding factor 1. (384 aa)
W5K9M8_ASTMXUncharacterized protein. (174 aa)
map3k20Uncharacterized protein. (888 aa)
WdpcpUncharacterized protein. (98 aa)
ift52Intraflagellar transport 52 homolog (Chlamydomonas). (435 aa)
en1Homeobox protein engrailed-like. (227 aa)
ift140Intraflagellar transport 140 homolog (Chlamydomonas). (1257 aa)
LOC103046407Protein kinase domain containing, cytoplasmic b. (464 aa)
sema3cSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; Belongs to the semaphorin family. (743 aa)
ENSAMXP00000037031MKS transition zone complex subunit 1. (534 aa)
etv4Ets variant 4. (520 aa)
fbxw4F-box and WD repeat domain containing 4. (393 aa)
ENSAMXP00000035369Ring finger protein 165a. (321 aa)
MSX1Msh homeobox 1. (201 aa)
LOC103032320Homeobox C10a. (348 aa)
Wdr19WD repeat domain 19. (1339 aa)
fgf4Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (191 aa)
LOC103024953Ring finger protein 165b. (351 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1801 aa)
tbx4T-box transcription factor 4. (558 aa)
ENSAMXP00000028486Mothers against decapentaplegic homolog. (493 aa)
W5LU02_ASTMXGremlin. (175 aa)
fras1Fraser extracellular matrix complex subunit 1. (3998 aa)
W5LL88_ASTMXSp8 transcription factor. (441 aa)
LOC103029394Mothers against decapentaplegic homolog. (544 aa)
sall1Spalt-like transcription factor 1a. (1308 aa)
LOC103022359Mothers against decapentaplegic homolog. (587 aa)
dkk1Dickkopf WNT signaling pathway inhibitor 1b. (243 aa)
rpgrip1lRPGRIP1 like. (1277 aa)
W5LD66_ASTMXMothers against decapentaplegic homolog. (573 aa)
Sp9Sp9 transcription factor. (443 aa)
W5L3I5_ASTMXATRX chromatin remodeler. (1989 aa)
W5L115_ASTMXProtein kinase domain-containing protein. (440 aa)
LOC103045402FRAS1 related extracellular matrix 2b. (3110 aa)
LOC103024223Secreted frizzled-related protein 2 like. (312 aa)
LOC103032831Spalt-like transcription factor 3a. (1332 aa)
Tbx5T-box transcription factor 5a. (522 aa)
W5KN49_ASTMXUncharacterized protein; Belongs to the heparin-binding growth factors family. (67 aa)
LOC103047816Zgc:153993. (204 aa)
W5KIU0_ASTMXMKS transition zone complex subunit 1. (528 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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