STRINGSTRING
sp8 sp8 tbx3 tbx3 bcl2l11 bcl2l11 LOC103030680 LOC103030680 LOC103037976 LOC103037976 ENSAMXP00000050565 ENSAMXP00000050565 ENSAMXP00000053345 ENSAMXP00000053345 ALX3 ALX3 hand2 hand2 sall4 sall4 crbn crbn LOC103032217 LOC103032217 LOC103024888 LOC103024888 Bax Bax Frem3 Frem3 nipbl nipbl W5KIU0_ASTMX W5KIU0_ASTMX W5KN49_ASTMX W5KN49_ASTMX Tbx5 Tbx5 LOC103024223 LOC103024223 Med12 Med12 LOC103045402 LOC103045402 W5L115_ASTMX W5L115_ASTMX Sp9 Sp9 W5L7B9_ASTMX W5L7B9_ASTMX W5LD66_ASTMX W5LD66_ASTMX rpgrip1l rpgrip1l fbln1 fbln1 dkk1 dkk1 LOC103022359 LOC103022359 LOC103029394 LOC103029394 W5LL88_ASTMX W5LL88_ASTMX fras1 fras1 LOC103045069 LOC103045069 W5LU02_ASTMX W5LU02_ASTMX LOC103029696 LOC103029696 ENSAMXP00000028486 ENSAMXP00000028486 tbx4 tbx4 med1 med1 fgf4 fgf4 CDH2 CDH2 Wdr19 Wdr19 LOC103032320 LOC103032320 MSX1 MSX1 fbxw4 fbxw4 ENSAMXP00000037031 ENSAMXP00000037031 ift140 ift140 en1 en1 ift52 ift52 ENSAMXP00000041750 ENSAMXP00000041750 Tll1 Tll1 Wdpcp Wdpcp map3k20 map3k20 W5K9M8_ASTMX W5K9M8_ASTMX hoxc8 hoxc8 lef1 lef1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sp8Sp8 transcription factor a. (459 aa)
tbx3T-box transcription factor 3a. (706 aa)
bcl2l11Bclx_interact domain-containing protein. (203 aa)
LOC103030680Cadherin 2, type 1, N-cadherin (neuronal); Cadherins are calcium-dependent cell adhesion proteins. (898 aa)
LOC103037976Homeobox protein engrailed-like. (286 aa)
ENSAMXP00000050565Dickkopf WNT signaling pathway inhibitor 1a. (277 aa)
ENSAMXP00000053345MH1 domain-containing protein. (187 aa)
ALX3ALX homeobox 3. (359 aa)
hand2Heart and neural crest derivatives expressed 2. (200 aa)
sall4Spalt-like transcription factor 4. (1107 aa)
crbnCereblon. (445 aa)
LOC103032217Dickkopf_N domain-containing protein. (277 aa)
LOC103024888Metalloendopeptidase. (976 aa)
BaxBCL2 associated X, apoptosis regulator a. (190 aa)
Frem3Fras1 related extracellular matrix 3. (3111 aa)
nipblNipped-B protein. (2745 aa)
W5KIU0_ASTMXMKS transition zone complex subunit 1. (528 aa)
W5KN49_ASTMXUncharacterized protein; Belongs to the heparin-binding growth factors family. (67 aa)
Tbx5T-box transcription factor 5a. (522 aa)
LOC103024223Secreted frizzled-related protein 2 like. (312 aa)
Med12Mediator complex subunit 12. (2026 aa)
LOC103045402FRAS1 related extracellular matrix 2b. (3110 aa)
W5L115_ASTMXProtein kinase domain-containing protein. (440 aa)
Sp9Sp9 transcription factor. (443 aa)
W5L7B9_ASTMXFibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes. (665 aa)
W5LD66_ASTMXMothers against decapentaplegic homolog. (573 aa)
rpgrip1lRPGRIP1 like. (1277 aa)
fbln1Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes. (681 aa)
dkk1Dickkopf WNT signaling pathway inhibitor 1b. (243 aa)
LOC103022359Mothers against decapentaplegic homolog. (587 aa)
LOC103029394Mothers against decapentaplegic homolog. (544 aa)
W5LL88_ASTMXSp8 transcription factor. (441 aa)
fras1Fraser extracellular matrix complex subunit 1. (3998 aa)
LOC103045069Metalloendopeptidase. (1044 aa)
W5LU02_ASTMXGremlin. (175 aa)
LOC103029696Uncharacterized protein. (205 aa)
ENSAMXP00000028486Mothers against decapentaplegic homolog. (493 aa)
tbx4T-box transcription factor 4. (558 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1801 aa)
fgf4Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (191 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (903 aa)
Wdr19WD repeat domain 19. (1339 aa)
LOC103032320Homeobox C10a. (348 aa)
MSX1Msh homeobox 1. (201 aa)
fbxw4F-box and WD repeat domain containing 4. (393 aa)
ENSAMXP00000037031MKS transition zone complex subunit 1. (534 aa)
ift140Intraflagellar transport 140 homolog (Chlamydomonas). (1257 aa)
en1Homeobox protein engrailed-like. (227 aa)
ift52Intraflagellar transport 52 homolog (Chlamydomonas). (435 aa)
ENSAMXP00000041750Uncharacterized protein. (104 aa)
Tll1Metalloendopeptidase. (1022 aa)
WdpcpUncharacterized protein. (98 aa)
map3k20Uncharacterized protein. (888 aa)
W5K9M8_ASTMXUncharacterized protein. (174 aa)
hoxc8Homeobox C8a. (254 aa)
lef1Lymphoid enhancer-binding factor 1. (384 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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