Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ENSAMXP00000033395 | LOC103039499 | ENSAMXP00000033395 | ENSAMXP00000022186 | GATA binding protein 1a. | Uncharacterized protein. | 0.463 |
| ENSAMXP00000033395 | Tal1 | ENSAMXP00000033395 | ENSAMXP00000054373 | GATA binding protein 1a. | T-cell acute lymphocytic leukemia 1. | 0.904 |
| ENSAMXP00000033395 | lmo2 | ENSAMXP00000033395 | ENSAMXP00000028177 | GATA binding protein 1a. | LIM domain only 2 (rhombotin-like 1). | 0.956 |
| ENSAMXP00000033395 | med1 | ENSAMXP00000033395 | ENSAMXP00000029583 | GATA binding protein 1a. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.408 |
| ENSAMXP00000033395 | trim33 | ENSAMXP00000033395 | ENSAMXP00000040174 | GATA binding protein 1a. | Tripartite motif containing 33. | 0.583 |
| Hdac9 | cftr | ENSAMXP00000004805 | ENSAMXP00000000447 | Uncharacterized protein. | Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. | 0.400 |
| LOC103024888 | chrd | ENSAMXP00000003250 | ENSAMXP00000012078 | Metalloendopeptidase. | Chordin; Belongs to the chordin family. | 0.789 |
| LOC103025973 | W5L6U8_ASTMX | ENSAMXP00000012293 | ENSAMXP00000015560 | Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. | Protein kinase C. | 0.911 |
| LOC103025973 | prkcb | ENSAMXP00000012293 | ENSAMXP00000044753 | Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. | Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. | 0.900 |
| LOC103030495 | cftr | ENSAMXP00000031037 | ENSAMXP00000000447 | Histone deacetylase 9b. | Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. | 0.400 |
| LOC103031807 | Tal1 | ENSAMXP00000017595 | ENSAMXP00000054373 | Uncharacterized protein. | T-cell acute lymphocytic leukemia 1. | 0.864 |
| LOC103031807 | lmo2 | ENSAMXP00000017595 | ENSAMXP00000028177 | Uncharacterized protein. | LIM domain only 2 (rhombotin-like 1). | 0.938 |
| LOC103031807 | med1 | ENSAMXP00000017595 | ENSAMXP00000029583 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.408 |
| LOC103039499 | ENSAMXP00000033395 | ENSAMXP00000022186 | ENSAMXP00000033395 | Uncharacterized protein. | GATA binding protein 1a. | 0.463 |
| LOC103039499 | Lclat1 | ENSAMXP00000022186 | ENSAMXP00000041480 | Uncharacterized protein. | Lysocardiolipin acyltransferase 1. | 0.515 |
| LOC103039499 | Tal1 | ENSAMXP00000022186 | ENSAMXP00000054373 | Uncharacterized protein. | T-cell acute lymphocytic leukemia 1. | 0.493 |
| LOC103039499 | ncoa2 | ENSAMXP00000022186 | ENSAMXP00000000516 | Uncharacterized protein. | Nuclear receptor coactivator. | 0.699 |
| LOC103042559 | W5KF46_ASTMX | ENSAMXP00000043824 | ENSAMXP00000006207 | Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] | 0.903 |
| LOC103042559 | tgfbr2 | ENSAMXP00000043824 | ENSAMXP00000021003 | Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.902 |
| LOC103045069 | chrd | ENSAMXP00000021187 | ENSAMXP00000012078 | Metalloendopeptidase. | Chordin; Belongs to the chordin family. | 0.789 |
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