(9 nodes) Angioblast cell migration network (Astyanax mexicanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	efnb2	Ephrin-B2a; Belongs to the ephrin family. (342 aa)
	W5KRW1_ASTMX	Eph receptor B4a. (992 aa)
	ENSAMXP00000032319	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (298 aa)
	LOC103025241	Apelin receptor a; Belongs to the G-protein coupled receptor 1 family. (359 aa)
	Apln	Uncharacterized protein. (331 aa)
	LOC103035447	Vascular endothelial growth factor Aa; Belongs to the PDGF/VEGF growth factor family. (265 aa)
	apela	Uncharacterized protein. (55 aa)
	ENSAMXP00000031097	Ephrin-B2b. (229 aa)
	W5LSB9_ASTMX	Apelin receptor b; Belongs to the G-protein coupled receptor 1 family. (364 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Apln	LOC103025241	ENSAMXP00000037528	ENSAMXP00000025540	Uncharacterized protein.	Apelin receptor a; Belongs to the G-protein coupled receptor 1 family.	0.991
Apln	W5LSB9_ASTMX	ENSAMXP00000037528	ENSAMXP00000025817	Uncharacterized protein.	Apelin receptor b; Belongs to the G-protein coupled receptor 1 family.	0.987
Apln	apela	ENSAMXP00000037528	ENSAMXP00000049544	Uncharacterized protein.	Uncharacterized protein.	0.692
ENSAMXP00000031097	W5KRW1_ASTMX	ENSAMXP00000031097	ENSAMXP00000010323	Ephrin-B2b.	Eph receptor B4a.	0.673
ENSAMXP00000032319	W5KRW1_ASTMX	ENSAMXP00000032319	ENSAMXP00000010323	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Eph receptor B4a.	0.673
LOC103025241	Apln	ENSAMXP00000025540	ENSAMXP00000037528	Apelin receptor a; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.991
LOC103025241	W5LSB9_ASTMX	ENSAMXP00000025540	ENSAMXP00000025817	Apelin receptor a; Belongs to the G-protein coupled receptor 1 family.	Apelin receptor b; Belongs to the G-protein coupled receptor 1 family.	0.909
LOC103025241	apela	ENSAMXP00000025540	ENSAMXP00000049544	Apelin receptor a; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.886
W5KRW1_ASTMX	ENSAMXP00000031097	ENSAMXP00000010323	ENSAMXP00000031097	Eph receptor B4a.	Ephrin-B2b.	0.673
W5KRW1_ASTMX	ENSAMXP00000032319	ENSAMXP00000010323	ENSAMXP00000032319	Eph receptor B4a.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.673
W5KRW1_ASTMX	efnb2	ENSAMXP00000010323	ENSAMXP00000013100	Eph receptor B4a.	Ephrin-B2a; Belongs to the ephrin family.	0.773
W5LSB9_ASTMX	Apln	ENSAMXP00000025817	ENSAMXP00000037528	Apelin receptor b; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.987
W5LSB9_ASTMX	LOC103025241	ENSAMXP00000025817	ENSAMXP00000025540	Apelin receptor b; Belongs to the G-protein coupled receptor 1 family.	Apelin receptor a; Belongs to the G-protein coupled receptor 1 family.	0.909
W5LSB9_ASTMX	apela	ENSAMXP00000025817	ENSAMXP00000049544	Apelin receptor b; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.883
apela	Apln	ENSAMXP00000049544	ENSAMXP00000037528	Uncharacterized protein.	Uncharacterized protein.	0.692
apela	LOC103025241	ENSAMXP00000049544	ENSAMXP00000025540	Uncharacterized protein.	Apelin receptor a; Belongs to the G-protein coupled receptor 1 family.	0.886
apela	W5LSB9_ASTMX	ENSAMXP00000049544	ENSAMXP00000025817	Uncharacterized protein.	Apelin receptor b; Belongs to the G-protein coupled receptor 1 family.	0.883
efnb2	W5KRW1_ASTMX	ENSAMXP00000013100	ENSAMXP00000010323	Ephrin-B2a; Belongs to the ephrin family.	Eph receptor B4a.	0.773