STRINGSTRING
LOC103030977 LOC103030977 tgfb1 tgfb1 bag3 bag3 Dmap1 Dmap1 W5KDD5_ASTMX W5KDD5_ASTMX W5KDJ8_ASTMX W5KDJ8_ASTMX LOC103022345 LOC103022345 LOC103024607 LOC103024607 W5LBB0_ASTMX W5LBB0_ASTMX LOC103045821 LOC103045821 Ubr5 Ubr5 ENSAMXP00000034706 ENSAMXP00000034706 smo smo ipo5 ipo5 LOC103043824 LOC103043824 ENSAMXP00000051389 ENSAMXP00000051389 zpr1 zpr1 tgfb2 tgfb2 ENSAMXP00000054408 ENSAMXP00000054408
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103030977Zinc finger CCCH-type containing 12A. (608 aa)
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
bag3BCL2 associated athanogene 3. (527 aa)
Dmap1DNA methyltransferase 1 associated protein 1. (454 aa)
W5KDD5_ASTMXTranslocated promoter region a, nuclear basket protein. (1866 aa)
W5KDJ8_ASTMXJunction plakoglobin b. (709 aa)
LOC103022345Calcineurin-like EF-hand protein 2. (194 aa)
LOC103024607Transforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
W5LBB0_ASTMXEpithelial cell transforming 2. (843 aa)
LOC103045821Junction plakoglobin a. (724 aa)
Ubr5Ubiquitin protein ligase E3 component n-recognin 5. (2539 aa)
ENSAMXP00000034706Uncharacterized protein. (351 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (840 aa)
ipo5Karyopherin (importin) beta 3. (1094 aa)
LOC103043824Leptin a. (172 aa)
ENSAMXP00000051389Translocated promoter region b, nuclear basket protein. (2262 aa)
zpr1ZPR1 zinc finger. (443 aa)
tgfb2Transforming growth factor beta; Belongs to the TGF-beta family. (401 aa)
ENSAMXP00000054408Si:dkey-206d17.12. (289 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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