STRINGSTRING
LOC103042257 LOC103042257 Wnt10a Wnt10a HAND1 HAND1 tgfb1 tgfb1 W5K8B8_ASTMX W5K8B8_ASTMX Bax Bax Prkci Prkci W5KN49_ASTMX W5KN49_ASTMX LOC103024607 LOC103024607 Rogdi Rogdi LOC103038005 LOC103038005 bsg bsg nectin1 nectin1 ankrd11 ankrd11 shh shh LOC103046695 LOC103046695 fgf4 fgf4 LOC103033177 LOC103033177 CDH2 CDH2 Eda Eda MSX1 MSX1 smo smo LOC103043017 LOC103043017 serpine1 serpine1 LOC103032967 LOC103032967 ENSAMXP00000042051 ENSAMXP00000042051 LOC103038145 LOC103038145 id3 id3 sostdc1 sostdc1 ENSAMXP00000043951 ENSAMXP00000043951 ENSAMXP00000044669 ENSAMXP00000044669 lef1 lef1 ENSAMXP00000044990 ENSAMXP00000044990 LOC103034760 LOC103034760 ENSAMXP00000045776 ENSAMXP00000045776 wnt6 wnt6 bcl2l11 bcl2l11 LOC103030680 LOC103030680 phex phex LOC103045744 LOC103045744 ENSAMXP00000049817 ENSAMXP00000049817 LOC103041473 LOC103041473 nf2 nf2 fam20a fam20a ENSAMXP00000052402 ENSAMXP00000052402 nkx2-3 nkx2-3 pam pam LOC103041890 LOC103041890 ENSAMXP00000054825 ENSAMXP00000054825 pitx2 pitx2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103042257Uncharacterized protein. (362 aa)
Wnt10aProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (388 aa)
HAND1Heart and neural crest derivatives expressed 1. (157 aa)
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
W5K8B8_ASTMXThrombospondin-type laminin G domain and EAR repeats b. (446 aa)
BaxBCL2 associated X, apoptosis regulator a. (190 aa)
PrkciProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (546 aa)
W5KN49_ASTMXUncharacterized protein; Belongs to the heparin-binding growth factors family. (67 aa)
LOC103024607Transforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
RogdiRogdi atypical leucine zipper. (288 aa)
LOC103038005Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family. (263 aa)
bsgBasigin. (394 aa)
nectin1Nectin cell adhesion molecule 1b. (504 aa)
ankrd11Ankyrin repeat domain 11. (2857 aa)
shhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (429 aa)
LOC103046695Neurofibromin 2b (merlin). (587 aa)
fgf4Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (191 aa)
LOC103033177Cytochrome P450, family 26, subfamily b, polypeptide 1; Belongs to the cytochrome P450 family. (511 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (903 aa)
EdaEctodysplasin A; Belongs to the tumor necrosis factor family. (449 aa)
MSX1Msh homeobox 1. (201 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (840 aa)
LOC103043017Ssu-2 homolog, tandem duplicate 4. (378 aa)
serpine1Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1; Belongs to the serpin family. (401 aa)
LOC103032967Ssu-2 homolog, related sequence 1. (417 aa)
ENSAMXP00000042051Integrin beta; Belongs to the integrin beta chain family. (503 aa)
LOC103038145TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (362 aa)
id3Inhibitor of DNA binding 3. (112 aa)
sostdc1Sclerostin domain containing 1a. (227 aa)
ENSAMXP00000043951Integrin beta. (210 aa)
ENSAMXP00000044669Uncharacterized protein. (290 aa)
lef1Lymphoid enhancer-binding factor 1. (384 aa)
ENSAMXP00000044990Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (259 aa)
LOC103034760FAM20C golgi associated secretory pathway kinase a. (595 aa)
ENSAMXP00000045776Nerve growth factor receptor a (TNFR superfamily, member 16). (419 aa)
wnt6Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (354 aa)
bcl2l11Bclx_interact domain-containing protein. (203 aa)
LOC103030680Cadherin 2, type 1, N-cadherin (neuronal); Cadherins are calcium-dependent cell adhesion proteins. (898 aa)
phexPhosphate regulating endopeptidase homolog, X-linked. (744 aa)
LOC103045744Colony stimulating factor 1a (macrophage). (531 aa)
ENSAMXP00000049817TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (165 aa)
LOC103041473FAM20C golgi associated secretory pathway kinase b. (574 aa)
nf2Neurofibromin 2a (merlin). (591 aa)
fam20aFAM20A golgi associated secretory pathway pseudokinase. (529 aa)
ENSAMXP00000052402TNF superfamily member 11; Belongs to the tumor necrosis factor family. (231 aa)
nkx2-3NK2 homeobox 3. (328 aa)
pamPeptidylglycine alpha-amidating monooxygenase. (1006 aa)
LOC103041890Aquaporin 1a (Colton blood group), tandem duplicate 2; Belongs to the MIP/aquaporin (TC 1.A.8) family. (266 aa)
ENSAMXP00000054825Colony stimulating factor 1b (macrophage). (298 aa)
pitx2Homeobox protein. (300 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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