STRINGSTRING
tgfb1 tgfb1 LOC103024607 LOC103024607 Csf1r Csf1r MSX1 MSX1 TNFRSF11B TNFRSF11B LOC103038582 LOC103038582 ENSAMXP00000045776 ENSAMXP00000045776 LOC103045744 LOC103045744 ENSAMXP00000054825 ENSAMXP00000054825
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
LOC103024607Transforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
Csf1rColony stimulating factor 1 receptor, a; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (972 aa)
MSX1Msh homeobox 1. (201 aa)
TNFRSF11BTNF receptor superfamily member 11b. (406 aa)
LOC103038582Si:ch211-286o17.1. (326 aa)
ENSAMXP00000045776Nerve growth factor receptor a (TNFR superfamily, member 16). (419 aa)
LOC103045744Colony stimulating factor 1a (macrophage). (531 aa)
ENSAMXP00000054825Colony stimulating factor 1b (macrophage). (298 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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