STRINGSTRING
tgfb1 tgfb1 itgb8 itgb8 LOC103024607 LOC103024607 batf batf tgfbr2 tgfbr2 batf3 batf3 camk4 camk4 DCSTAMP DCSTAMP ENSAMXP00000038877 ENSAMXP00000038877 ENSAMXP00000042051 ENSAMXP00000042051 LOC103042559 LOC103042559 ENSAMXP00000043951 ENSAMXP00000043951 LOC103036728 LOC103036728 DCSTAMP-2 DCSTAMP-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
itgb8Integrin beta; Belongs to the integrin beta chain family. (790 aa)
LOC103024607Transforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
batfBasic leucine zipper transcription factor, ATF-like. (123 aa)
tgfbr2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (595 aa)
batf3Basic leucine zipper transcription factor, ATF-like 3. (134 aa)
camk4Calcium/calmodulin-dependent protein kinase IV; Belongs to the protein kinase superfamily. (366 aa)
DCSTAMPDendrocyte expressed seven transmembrane protein. (480 aa)
ENSAMXP00000038877TNFR-Cys domain-containing protein. (225 aa)
ENSAMXP00000042051Integrin beta; Belongs to the integrin beta chain family. (503 aa)
LOC103042559Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (543 aa)
ENSAMXP00000043951Integrin beta. (210 aa)
LOC103036728Si:ch73-60h1.1. (475 aa)
DCSTAMP-2Dendrocyte expressed seven transmembrane protein. (415 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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