17 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fadd	Fas (tnfrsf6)-associated via death domain. (190 aa)
	LOC103040345	Ring finger and CCCH-type domains 2. (1061 aa)
	bcl2l11	Bclx_interact domain-containing protein. (203 aa)
	Bax	BCL2 associated X, apoptosis regulator a. (190 aa)
	Ppp2r3c	Protein phosphatase 2, regulatory subunit B'', gamma. (400 aa)
	gpam	Glycerol-3-phosphate acyltransferase 1, mitochondrial. (824 aa)
	LOC103026897	Galectin. (157 aa)
	tgfb1	Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
	il7r	Interleukin 7 receptor. (380 aa)
	ENSAMXP00000041728	Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily. (351 aa)
	rc3h1	Ring finger and CCCH-type domains 1a. (1106 aa)
	ENSAMXP00000038914	Uncharacterized protein. (363 aa)
	W5LPS3_ASTMX	Solute carrier family 46 member 2. (399 aa)
	LOC103035115	Ring finger and CCCH-type domains 1b. (1124 aa)
	foxn1	Forkhead box N1. (582 aa)
	SPNS2	Sphingolipid transporter 2. (515 aa)
	LOC103024607	Transforming growth factor beta; Belongs to the TGF-beta family. (377 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bax	bcl2l11	ENSAMXP00000005311	ENSAMXP00000046456	BCL2 associated X, apoptosis regulator a.	Bclx_interact domain-containing protein.	0.991
ENSAMXP00000041728	fadd	ENSAMXP00000041728	ENSAMXP00000007593	Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.	Fas (tnfrsf6)-associated via death domain.	0.990
LOC103024607	tgfb1	ENSAMXP00000010023	ENSAMXP00000002667	Transforming growth factor beta; Belongs to the TGF-beta family.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.902
LOC103035115	LOC103040345	ENSAMXP00000019814	ENSAMXP00000006962	Ring finger and CCCH-type domains 1b.	Ring finger and CCCH-type domains 2.	0.578
LOC103040345	LOC103035115	ENSAMXP00000006962	ENSAMXP00000019814	Ring finger and CCCH-type domains 2.	Ring finger and CCCH-type domains 1b.	0.578
LOC103040345	rc3h1	ENSAMXP00000006962	ENSAMXP00000039649	Ring finger and CCCH-type domains 2.	Ring finger and CCCH-type domains 1a.	0.580
bcl2l11	Bax	ENSAMXP00000046456	ENSAMXP00000005311	Bclx_interact domain-containing protein.	BCL2 associated X, apoptosis regulator a.	0.991
fadd	ENSAMXP00000041728	ENSAMXP00000007593	ENSAMXP00000041728	Fas (tnfrsf6)-associated via death domain.	Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.	0.990
rc3h1	LOC103040345	ENSAMXP00000039649	ENSAMXP00000006962	Ring finger and CCCH-type domains 1a.	Ring finger and CCCH-type domains 2.	0.580
tgfb1	LOC103024607	ENSAMXP00000002667	ENSAMXP00000010023	Transforming growth factor beta; Belongs to the TGF-beta family.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.902