STRINGSTRING
rtn4r rtn4r HOMER1 HOMER1 LOC103047839 LOC103047839 W5K581_ASTMX W5K581_ASTMX SYNDIG1 SYNDIG1 LOC103040208 LOC103040208 LOC103024023 LOC103024023 LOC103027763 LOC103027763
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rtn4rReticulon 4 receptor. (470 aa)
HOMER1Homer scaffold protein 1. (371 aa)
LOC103047839Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (460 aa)
W5K581_ASTMXPresenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (436 aa)
SYNDIG1Synapse differentiation inducing 1. (280 aa)
LOC103040208Homer scaffold protein 1b. (398 aa)
LOC103024023BAI1 associated protein 2. (528 aa)
LOC103027763BAI1-associated protein 2a. (572 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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