STRINGSTRING
ctdp1 ctdp1 ENSAMXP00000028486 ENSAMXP00000028486 W5LRA5_ASTMX W5LRA5_ASTMX LOC103029394 LOC103029394 W5LI45_ASTMX W5LI45_ASTMX mstn mstn W5LGH0_ASTMX W5LGH0_ASTMX LOC103022359 LOC103022359 W5LD66_ASTMX W5LD66_ASTMX mlip mlip mymk mymk gsk3b gsk3b Akap6 Akap6 gtf2ird1 gtf2ird1 LOC103037703 LOC103037703 parp1 parp1 tomm70 tomm70 parp2 parp2 lmcd1 lmcd1 LOC103043574 LOC103043574 errfi1 errfi1 TNNC1 TNNC1 pde9a pde9a LOC103032471 LOC103032471 pi16 pi16 tnfrsf1b tnfrsf1b LOC103021519 LOC103021519 ENSAMXP00000047894 ENSAMXP00000047894 myog myog ENSAMXP00000051362 ENSAMXP00000051362 ENSAMXP00000053345 ENSAMXP00000053345 LOC103042872 LOC103042872 gsk3a gsk3a ENSAMXP00000029929 ENSAMXP00000029929
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ctdp1RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (972 aa)
ENSAMXP00000028486Mothers against decapentaplegic homolog. (493 aa)
W5LRA5_ASTMXUncharacterized protein. (157 aa)
LOC103029394Mothers against decapentaplegic homolog. (544 aa)
W5LI45_ASTMXTumor necrosis factor receptor superfamily, member 1a. (398 aa)
mstnMyostatin b. (435 aa)
W5LGH0_ASTMXPhosphodiesterase. (438 aa)
LOC103022359Mothers against decapentaplegic homolog. (587 aa)
W5LD66_ASTMXMothers against decapentaplegic homolog. (573 aa)
mlipUncharacterized protein. (898 aa)
mymkMyomaker, myoblast fusion factor. (243 aa)
gsk3bGlycogen synthase kinase 3 beta, genome duplicate a; Belongs to the protein kinase superfamily. (421 aa)
Akap6Uncharacterized protein. (728 aa)
gtf2ird1GTF2I repeat domain containing 1. (976 aa)
LOC103037703Phosphodiesterase. (518 aa)
parp1Poly [ADP-ribose] polymerase. (1021 aa)
tomm70Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (629 aa)
parp2Poly [ADP-ribose] polymerase. (642 aa)
lmcd1LIM and cysteine-rich domains 1. (356 aa)
LOC103043574Glycogen synthase kinase 3 beta, genome duplicate b; Belongs to the protein kinase superfamily. (420 aa)
errfi1ERBB receptor feedback inhibitor 1a. (480 aa)
TNNC1Uncharacterized protein. (161 aa)
pde9aPhosphodiesterase. (510 aa)
LOC103032471Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily. (429 aa)
pi16SCP domain-containing protein; Belongs to the CRISP family. (277 aa)
tnfrsf1bTumor necrosis factor receptor superfamily, member 1B. (450 aa)
LOC103021519Troponin C type 1b (slow). (214 aa)
ENSAMXP00000047894Endothelin 1. (162 aa)
myogMyogenin. (254 aa)
ENSAMXP00000051362Cardiomyopathy associated 5. (2012 aa)
ENSAMXP00000053345MH1 domain-containing protein. (187 aa)
LOC103042872Insulin-like growth factor binding protein 5a. (270 aa)
gsk3aGlycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily. (440 aa)
ENSAMXP00000029929Interleukin 6 signal transducer. (815 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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