50 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103046391	Carboxypeptidase O. (363 aa)
	LYPD6	LY6/PLAUR domain containing 6. (167 aa)
	LOC103033419	Complexin 3a. (156 aa)
	LOC103041622	Zgc:109949. (271 aa)
	LOC103021450	Ephrin-A1b; Belongs to the ephrin family. (233 aa)
	ENSAMXP00000052375	LY6/PLAUR domain containing 6. (148 aa)
	LOC103028810	Ephrin-A5a; Belongs to the ephrin family. (234 aa)
	LOC103036517	Neuritin 1b. (143 aa)
	LOC103032765	Immunoglobin superfamily, member 21a. (475 aa)
	ENSAMXP00000047318	Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (248 aa)
	ENSAMXP00000046830	Peptidase_M14 domain-containing protein. (271 aa)
	nrn1	Neuritin 1a. (143 aa)
	efna5	Ephrin-A5b; Belongs to the ephrin family. (230 aa)
	LOC103025650	Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (553 aa)
	def8	Differentially expressed in FDCP 8 homolog. (439 aa)
	eepd1	Endonuclease/exonuclease/phosphatase family domain containing 1. (506 aa)
	ENSAMXP00000045327	NLRC4_HD2 domain-containing protein. (697 aa)
	gphn	Gephyrin b. (796 aa)
	LOC103034168	Glypican 5c; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (597 aa)
	rtn4r	Reticulon 4 receptor. (470 aa)
	LOC103045233	Immunoglobin superfamily, member 21b. (486 aa)
	LOC103029484	Si:ch211-237i5.4. (345 aa)
	Gpc2	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (520 aa)
	rtn4rl2	Reticulon 4 receptor-like 2 a. (456 aa)
	LOC103039106	Complexin 3b. (156 aa)
	LOC103033432	Reticulon 4 receptor-like 2b. (471 aa)
	LOC103024821	Uncharacterized protein. (352 aa)
	ENSAMXP00000035305	Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (530 aa)
	LOC103043379	LRRCT domain-containing protein. (824 aa)
	ENSAMXP00000033268	Netrin G2. (527 aa)
	nrn1l	Neuritin 1-like a. (163 aa)
	Ntng2	Netrin g2a. (512 aa)
	ENSAMXP00000027593	Reticulon 4 receptor-like 1a. (426 aa)
	LOC103024775	Protein arginine methyltransferase 8b; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (413 aa)
	nod2	Nucleotide-binding oligomerization domain containing 2. (908 aa)
	gpc5	Glypican 5a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (579 aa)
	Gpc6	Glypican 6a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (528 aa)
	W5L7P6_ASTMX	Glypican 1a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (567 aa)
	W5L7K0_ASTMX	Glypican 5b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (571 aa)
	Ntng1	Netrin g1a. (530 aa)
	W5KWV5_ASTMX	Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released. (735 aa)
	LOC103026309	Folate receptor. (250 aa)
	Cntn2	Contactin 2. (996 aa)
	W5KRB5_ASTMX	Glypican 1b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (533 aa)
	LOC103043830	Ephrin-A1a; Belongs to the ephrin family. (224 aa)
	gpc3	Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (590 aa)
	Rtn4rl1	Reticulon 4 receptor-like 1b. (478 aa)
	Nod1	Nucleotide-binding oligomerization domain containing 1. (913 aa)
	CPO	Carboxypeptidase O. (372 aa)
	W5KCJ1_ASTMX	Vav 3 guanine nucleotide exchange factor b. (297 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000033268	Ntng2	ENSAMXP00000033268	ENSAMXP00000027941	Netrin G2.	Netrin g2a.	0.901
ENSAMXP00000035305	LOC103034168	ENSAMXP00000035305	ENSAMXP00000042299	Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 5c; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.404
ENSAMXP00000035305	W5L7K0_ASTMX	ENSAMXP00000035305	ENSAMXP00000015812	Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 5b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.404
ENSAMXP00000035305	gpc3	ENSAMXP00000035305	ENSAMXP00000008712	Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.404
ENSAMXP00000035305	gpc5	ENSAMXP00000035305	ENSAMXP00000019009	Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 5a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.404
ENSAMXP00000047318	Gpc2	ENSAMXP00000047318	ENSAMXP00000039489	Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.707
ENSAMXP00000047318	LOC103034168	ENSAMXP00000047318	ENSAMXP00000042299	Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 5c; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.404
ENSAMXP00000047318	W5L7K0_ASTMX	ENSAMXP00000047318	ENSAMXP00000015812	Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 5b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.404
ENSAMXP00000047318	gpc3	ENSAMXP00000047318	ENSAMXP00000008712	Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.404
ENSAMXP00000047318	gpc5	ENSAMXP00000047318	ENSAMXP00000019009	Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 5a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.404
Gpc2	ENSAMXP00000047318	ENSAMXP00000039489	ENSAMXP00000047318	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.707
Gpc2	LOC103034168	ENSAMXP00000039489	ENSAMXP00000042299	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 5c; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.404
Gpc2	W5L7K0_ASTMX	ENSAMXP00000039489	ENSAMXP00000015812	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 5b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.404
Gpc2	gpc3	ENSAMXP00000039489	ENSAMXP00000008712	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.404
Gpc2	gpc5	ENSAMXP00000039489	ENSAMXP00000019009	Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 5a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.404
Gpc6	LOC103034168	ENSAMXP00000018994	ENSAMXP00000042299	Glypican 6a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 5c; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.404
Gpc6	W5L7K0_ASTMX	ENSAMXP00000018994	ENSAMXP00000015812	Glypican 6a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 5b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.404
Gpc6	gpc3	ENSAMXP00000018994	ENSAMXP00000008712	Glypican 6a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.404
Gpc6	gpc5	ENSAMXP00000018994	ENSAMXP00000019009	Glypican 6a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Glypican 5a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.404
LOC103021450	LOC103028810	ENSAMXP00000052525	ENSAMXP00000052157	Ephrin-A1b; Belongs to the ephrin family.	Ephrin-A5a; Belongs to the ephrin family.	0.403