STRINGSTRING
LOC103021856 LOC103021856 Pdgfra Pdgfra nek8 nek8 RBM20 RBM20 bbs5 bbs5 W5KF46_ASTMX W5KF46_ASTMX ar ar W5L1C8_ASTMX W5L1C8_ASTMX flt3 flt3 W5L798_ASTMX W5L798_ASTMX tgfbr2 tgfbr2 invs invs LOC103036631 LOC103036631 ENSAMXP00000032178 ENSAMXP00000032178 LOC103028976 LOC103028976 LOC103035447 LOC103035447 ripply3 ripply3 LOC103042559 LOC103042559 atoh8 atoh8 cemip2 cemip2 LOC107197240 LOC107197240
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103021856Bone morphogenetic protein 2a. (405 aa)
PdgfraPlatelet-derived growth factor receptor, alpha polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (995 aa)
nek8NIMA-related kinase 8. (697 aa)
RBM20RNA binding motif protein 20. (993 aa)
bbs5Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family. (342 aa)
W5KF46_ASTMXTGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (561 aa)
arAndrogen receptor. (839 aa)
W5L1C8_ASTMXUncharacterized protein. (350 aa)
flt3Fms-related tyrosine kinase 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (983 aa)
W5L798_ASTMXYes-associated protein 1. (431 aa)
tgfbr2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (595 aa)
invsInversin. (1051 aa)
LOC103036631NK3 homeobox 2. (289 aa)
ENSAMXP00000032178Uncharacterized protein. (114 aa)
LOC103028976Bone morphogenetic protein 2b. (445 aa)
LOC103035447Vascular endothelial growth factor Aa; Belongs to the PDGF/VEGF growth factor family. (265 aa)
ripply3Ripply transcriptional repressor 3. (131 aa)
LOC103042559Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (543 aa)
atoh8BHLH domain-containing protein. (263 aa)
cemip2Cell migration inducing hyaluronidase 2. (1264 aa)
LOC107197240BHLH domain-containing protein. (244 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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