55 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103028441	Homeobox domain-containing protein. (275 aa)
	isl2	ISL LIM homeobox 2a. (359 aa)
	zdhhc16	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (383 aa)
	axin1	Axin 1. (866 aa)
	LOC103029665	Motor neuron and pancreas homeobox 2a. (282 aa)
	W5KHG4_ASTMX	Forkhead box N4. (419 aa)
	W5KJ68_ASTMX	Peptidylprolyl isomerase. (501 aa)
	LOC103045051	Oligodendrocyte transcription factor 4. (251 aa)
	LOC103045492	Homeobox domain-containing protein. (314 aa)
	gdf5	Growth differentiation factor 5. (431 aa)
	LOC103030717	Uncharacterized protein. (750 aa)
	W5L6N0_ASTMX	ISL LIM homeobox 2b. (346 aa)
	W5LD66_ASTMX	Mothers against decapentaplegic homolog. (573 aa)
	LOC103022359	Mothers against decapentaplegic homolog. (587 aa)
	mnx1	Motor neuron and pancreas homeobox 1. (270 aa)
	LOC103029394	Mothers against decapentaplegic homolog. (544 aa)
	W5LSA9_ASTMX	Atonal bHLH transcription factor 1c. (123 aa)
	W5LTK0_ASTMX	Forkhead box G1b. (323 aa)
	W5LU00_ASTMX	Forkhead box G1a. (337 aa)
	olig1	Oligodendrocyte transcription factor 1. (246 aa)
	shh	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (429 aa)
	ENSAMXP00000028486	Mothers against decapentaplegic homolog. (493 aa)
	ENSAMXP00000029520	Fork-head domain-containing protein. (286 aa)
	lhx4	LIM homeobox 4. (451 aa)
	zc4h2	Zinc finger, C4H2 domain containing. (225 aa)
	ENSAMXP00000031121	Uncharacterized protein. (365 aa)
	ENSAMXP00000031283	Fork-head domain-containing protein. (312 aa)
	ENSAMXP00000031679	Atonal bHLH transcription factor 1a. (132 aa)
	LOC103035022	Growth differentiation factor 6a. (406 aa)
	fgf8	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (210 aa)
	tbx2	T-box transcription factor 2b. (692 aa)
	LOC103032320	Homeobox C10a. (348 aa)
	gbx1	Gastrulation brain homeobox 1. (322 aa)
	ZC4H2	Zinc finger C4H2-type containing. (224 aa)
	Fgf3	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (220 aa)
	lhx9	LIM homeobox 9. (355 aa)
	LOC103032897	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (443 aa)
	fkbp8	Peptidylprolyl isomerase. (389 aa)
	Thrb	Thyroid hormone receptor beta. (490 aa)
	Olig3	Oligodendrocyte transcription factor 3. (274 aa)
	Mib1	Mindbomb E3 ubiquitin protein ligase 1. (1027 aa)
	ENSAMXP00000037985	Oligodendrocyte lineage transcription factor 2. (250 aa)
	LHX3	LIM homeobox 3. (399 aa)
	LOC103021841	Islet1, like. (328 aa)
	ENSAMXP00000041299	Atonal bHLH transcription factor 1b. (245 aa)
	LOC103021396	Ladybird homeobox 2. (264 aa)
	gsx1	Homeobox domain-containing protein. (273 aa)
	gsx2	GS homeobox 2. (260 aa)
	LOC103029147	Distal-less homeobox 4b. (231 aa)
	dlx6	Distal-less homeobox 6a. (247 aa)
	dlx3	Distal-less homeobox 3b. (265 aa)
	isl1	ISL LIM homeobox 1. (332 aa)
	Lhx2	LIM homeobox 2b. (396 aa)
	ENSAMXP00000053345	MH1 domain-containing protein. (187 aa)
	lbx1	Ladybird homeobox 1a. (264 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000028486	ENSAMXP00000029520	ENSAMXP00000028486	ENSAMXP00000029520	Mothers against decapentaplegic homolog.	Fork-head domain-containing protein.	0.425
ENSAMXP00000028486	ENSAMXP00000031283	ENSAMXP00000028486	ENSAMXP00000031283	Mothers against decapentaplegic homolog.	Fork-head domain-containing protein.	0.425
ENSAMXP00000028486	W5LTK0_ASTMX	ENSAMXP00000028486	ENSAMXP00000026464	Mothers against decapentaplegic homolog.	Forkhead box G1b.	0.425
ENSAMXP00000028486	W5LU00_ASTMX	ENSAMXP00000028486	ENSAMXP00000026616	Mothers against decapentaplegic homolog.	Forkhead box G1a.	0.425
ENSAMXP00000029520	ENSAMXP00000028486	ENSAMXP00000029520	ENSAMXP00000028486	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.425
ENSAMXP00000029520	ENSAMXP00000053345	ENSAMXP00000029520	ENSAMXP00000053345	Fork-head domain-containing protein.	MH1 domain-containing protein.	0.425
ENSAMXP00000029520	LOC103022359	ENSAMXP00000029520	ENSAMXP00000018891	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.425
ENSAMXP00000029520	LOC103029394	ENSAMXP00000029520	ENSAMXP00000019787	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.425
ENSAMXP00000029520	W5LD66_ASTMX	ENSAMXP00000029520	ENSAMXP00000017778	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.425
ENSAMXP00000031283	ENSAMXP00000028486	ENSAMXP00000031283	ENSAMXP00000028486	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.425
ENSAMXP00000031283	ENSAMXP00000053345	ENSAMXP00000031283	ENSAMXP00000053345	Fork-head domain-containing protein.	MH1 domain-containing protein.	0.425
ENSAMXP00000031283	LOC103022359	ENSAMXP00000031283	ENSAMXP00000018891	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.425
ENSAMXP00000031283	LOC103029394	ENSAMXP00000031283	ENSAMXP00000019787	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.425
ENSAMXP00000031283	W5LD66_ASTMX	ENSAMXP00000031283	ENSAMXP00000017778	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.425
ENSAMXP00000037985	LOC103032897	ENSAMXP00000037985	ENSAMXP00000036419	Oligodendrocyte lineage transcription factor 2.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.407
ENSAMXP00000037985	mnx1	ENSAMXP00000037985	ENSAMXP00000019714	Oligodendrocyte lineage transcription factor 2.	Motor neuron and pancreas homeobox 1.	0.411
ENSAMXP00000037985	shh	ENSAMXP00000037985	ENSAMXP00000028286	Oligodendrocyte lineage transcription factor 2.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.532
ENSAMXP00000053345	ENSAMXP00000029520	ENSAMXP00000053345	ENSAMXP00000029520	MH1 domain-containing protein.	Fork-head domain-containing protein.	0.425
ENSAMXP00000053345	ENSAMXP00000031283	ENSAMXP00000053345	ENSAMXP00000031283	MH1 domain-containing protein.	Fork-head domain-containing protein.	0.425
ENSAMXP00000053345	W5LTK0_ASTMX	ENSAMXP00000053345	ENSAMXP00000026464	MH1 domain-containing protein.	Forkhead box G1b.	0.425