18 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103046088	Si:ch73-40a2.1. (882 aa)
	W5KG74_ASTMX	Eph receptor A4, like. (947 aa)
	W5KGH2_ASTMX	Receptor protein-tyrosine kinase. (953 aa)
	Med12	Mediator complex subunit 12. (2026 aa)
	efnb2	Ephrin-B2a; Belongs to the ephrin family. (342 aa)
	EGR2	Early growth response 2. (391 aa)
	W5LD66_ASTMX	Mothers against decapentaplegic homolog. (573 aa)
	LOC103022359	Mothers against decapentaplegic homolog. (587 aa)
	LOC103029394	Mothers against decapentaplegic homolog. (544 aa)
	ENSAMXP00000028486	Mothers against decapentaplegic homolog. (493 aa)
	ENSAMXP00000031097	Ephrin-B2b. (229 aa)
	ENSAMXP00000032178	Uncharacterized protein. (114 aa)
	ENSAMXP00000032319	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (298 aa)
	MAFB	MAF bZIP transcription factor B. (420 aa)
	Mib1	Mindbomb E3 ubiquitin protein ligase 1. (1027 aa)
	ENSAMXP00000047819	Beta-1,3-N-acetylglucosaminyltransferase. (356 aa)
	egr2	Early growth response 2b. (409 aa)
	ENSAMXP00000053345	MH1 domain-containing protein. (187 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EGR2	egr2	ENSAMXP00000013108	ENSAMXP00000052560	Early growth response 2.	Early growth response 2b.	0.904
ENSAMXP00000031097	LOC103046088	ENSAMXP00000031097	ENSAMXP00000006094	Ephrin-B2b.	Si:ch73-40a2.1.	0.525
ENSAMXP00000031097	W5KG74_ASTMX	ENSAMXP00000031097	ENSAMXP00000006586	Ephrin-B2b.	Eph receptor A4, like.	0.582
ENSAMXP00000031097	W5KGH2_ASTMX	ENSAMXP00000031097	ENSAMXP00000006684	Ephrin-B2b.	Receptor protein-tyrosine kinase.	0.582
ENSAMXP00000032319	LOC103046088	ENSAMXP00000032319	ENSAMXP00000006094	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Si:ch73-40a2.1.	0.525
ENSAMXP00000032319	W5KG74_ASTMX	ENSAMXP00000032319	ENSAMXP00000006586	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Eph receptor A4, like.	0.582
ENSAMXP00000032319	W5KGH2_ASTMX	ENSAMXP00000032319	ENSAMXP00000006684	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Receptor protein-tyrosine kinase.	0.582
LOC103022359	LOC103029394	ENSAMXP00000018891	ENSAMXP00000019787	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC103022359	W5LD66_ASTMX	ENSAMXP00000018891	ENSAMXP00000017778	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC103029394	LOC103022359	ENSAMXP00000019787	ENSAMXP00000018891	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC103029394	W5LD66_ASTMX	ENSAMXP00000019787	ENSAMXP00000017778	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC103046088	ENSAMXP00000031097	ENSAMXP00000006094	ENSAMXP00000031097	Si:ch73-40a2.1.	Ephrin-B2b.	0.525
LOC103046088	ENSAMXP00000032319	ENSAMXP00000006094	ENSAMXP00000032319	Si:ch73-40a2.1.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.525
LOC103046088	efnb2	ENSAMXP00000006094	ENSAMXP00000013100	Si:ch73-40a2.1.	Ephrin-B2a; Belongs to the ephrin family.	0.525
W5KG74_ASTMX	ENSAMXP00000031097	ENSAMXP00000006586	ENSAMXP00000031097	Eph receptor A4, like.	Ephrin-B2b.	0.582
W5KG74_ASTMX	ENSAMXP00000032319	ENSAMXP00000006586	ENSAMXP00000032319	Eph receptor A4, like.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.582
W5KG74_ASTMX	efnb2	ENSAMXP00000006586	ENSAMXP00000013100	Eph receptor A4, like.	Ephrin-B2a; Belongs to the ephrin family.	0.619
W5KGH2_ASTMX	ENSAMXP00000031097	ENSAMXP00000006684	ENSAMXP00000031097	Receptor protein-tyrosine kinase.	Ephrin-B2b.	0.582
W5KGH2_ASTMX	ENSAMXP00000032319	ENSAMXP00000006684	ENSAMXP00000032319	Receptor protein-tyrosine kinase.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.582
W5KGH2_ASTMX	efnb2	ENSAMXP00000006684	ENSAMXP00000013100	Receptor protein-tyrosine kinase.	Ephrin-B2a; Belongs to the ephrin family.	0.619