48 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103032591	E3 ubiquitin-protein ligase. (853 aa)
	LOC103030977	Zinc finger CCCH-type containing 12A. (608 aa)
	W5K3Z4_ASTMX	Si:ch211-157b11.8. (394 aa)
	tgfb1	Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
	crtam	Ig-like domain-containing protein. (476 aa)
	W5KA92_ASTMX	Discs, large homolog 5b (Drosophila), tandem duplicate 1; Belongs to the MAGUK family. (1806 aa)
	marchf7	Membrane-associated ring finger (C3HC4) 7. (765 aa)
	loxl3	Lysyl oxidase-like 3a. (733 aa)
	W5KEH8_ASTMX	Ig-like domain-containing protein. (273 aa)
	W5KGI3_ASTMX	Si:ch211-203k16.3. (427 aa)
	LOC103040345	Ring finger and CCCH-type domains 2. (1061 aa)
	fgl1	Fibrinogen-like 1. (312 aa)
	LOC103032011	Leucine rich repeat containing 32. (680 aa)
	Ripor3	RIPOR family member 3. (969 aa)
	LOC103024607	Transforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
	tnfrsf21	Tumor necrosis factor receptor superfamily, member 21. (662 aa)
	Tbx21	T-box transcription factor 21. (577 aa)
	LOC103027415	Interferon regulatory factor. (310 aa)
	LOC103022442	Fibrinogen C-terminal domain-containing protein. (443 aa)
	LOC103034045	Uncharacterized protein. (645 aa)
	hlx	H2.0-like homeo box 1 (Drosophila). (374 aa)
	arg1	Arginase. (324 aa)
	LOC103035115	Ring finger and CCCH-type domains 1b. (1124 aa)
	cbfb	Core-binding factor subunit beta. (187 aa)
	socs1	Suppressor of cytokine signaling 1a. (194 aa)
	LOC111189321	V-set domain containing T cell activation inhibitor 1. (333 aa)
	LOC103047365	Galectin. (359 aa)
	LOC103022206	E3 ubiquitin-protein ligase. (874 aa)
	pawr	PRKC, apoptosis, WT1, regulator. (323 aa)
	ENSAMXP00000033608	Galectin. (306 aa)
	LOC103042873	Midkine a. (145 aa)
	LOC111194477	DNA helicase; Belongs to the MCM family. (827 aa)
	ripor2	RHO family interacting cell polarization regulator 2. (1116 aa)
	rc3h1	Ring finger and CCCH-type domains 1a. (1106 aa)
	arg2	Arginase. (348 aa)
	ENSAMXP00000042098	Midkine b. (157 aa)
	mad1l1	Mitotic arrest deficient 1 like 1. (717 aa)
	fgl2	Fibrinogen-like 2a. (448 aa)
	ENSAMXP00000048829	Uncharacterized protein. (354 aa)
	vsir	V-set immunoregulatory receptor. (283 aa)
	sdc4	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (244 aa)
	gpnmb	Glycoprotein (transmembrane) nmb. (678 aa)
	il20rb	Fibronectin type-III domain-containing protein. (304 aa)
	Dlg5	Discs, large homolog 5a (Drosophila); Belongs to the MAGUK family. (1945 aa)
	ENSAMXP00000054113	Phosphoprotein membrane anchor with glycosphingolipid microdomains 1. (387 aa)
	ENSAMXP00000054408	Si:dkey-206d17.12. (289 aa)
	LOC103043058	Lysyl oxidase-like 3b. (796 aa)
	glmn	Glomulin, FKBP associated protein a. (590 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000033608	ENSAMXP00000048829	ENSAMXP00000033608	ENSAMXP00000048829	Galectin.	Uncharacterized protein.	0.435
ENSAMXP00000048829	ENSAMXP00000033608	ENSAMXP00000048829	ENSAMXP00000033608	Uncharacterized protein.	Galectin.	0.435
ENSAMXP00000048829	LOC103047365	ENSAMXP00000048829	ENSAMXP00000029967	Uncharacterized protein.	Galectin.	0.435
ENSAMXP00000048829	LOC111189321	ENSAMXP00000048829	ENSAMXP00000028991	Uncharacterized protein.	V-set domain containing T cell activation inhibitor 1.	0.501
ENSAMXP00000048829	W5KEH8_ASTMX	ENSAMXP00000048829	ENSAMXP00000005989	Uncharacterized protein.	Ig-like domain-containing protein.	0.501
LOC103022206	LOC103032591	ENSAMXP00000030199	ENSAMXP00000000937	E3 ubiquitin-protein ligase.	E3 ubiquitin-protein ligase.	0.900
LOC103024607	LOC103032011	ENSAMXP00000010023	ENSAMXP00000009532	Transforming growth factor beta; Belongs to the TGF-beta family.	Leucine rich repeat containing 32.	0.788
LOC103024607	LOC103034045	ENSAMXP00000010023	ENSAMXP00000013625	Transforming growth factor beta; Belongs to the TGF-beta family.	Uncharacterized protein.	0.788
LOC103024607	cbfb	ENSAMXP00000010023	ENSAMXP00000021049	Transforming growth factor beta; Belongs to the TGF-beta family.	Core-binding factor subunit beta.	0.419
LOC103024607	sdc4	ENSAMXP00000010023	ENSAMXP00000049860	Transforming growth factor beta; Belongs to the TGF-beta family.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.643
LOC103024607	tgfb1	ENSAMXP00000010023	ENSAMXP00000002667	Transforming growth factor beta; Belongs to the TGF-beta family.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.902
LOC103027415	socs1	ENSAMXP00000010883	ENSAMXP00000026477	Interferon regulatory factor.	Suppressor of cytokine signaling 1a.	0.641
LOC103032011	LOC103024607	ENSAMXP00000009532	ENSAMXP00000010023	Leucine rich repeat containing 32.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.788
LOC103032011	tgfb1	ENSAMXP00000009532	ENSAMXP00000002667	Leucine rich repeat containing 32.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.788
LOC103032591	LOC103022206	ENSAMXP00000000937	ENSAMXP00000030199	E3 ubiquitin-protein ligase.	E3 ubiquitin-protein ligase.	0.900
LOC103034045	LOC103024607	ENSAMXP00000013625	ENSAMXP00000010023	Uncharacterized protein.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.788
LOC103034045	tgfb1	ENSAMXP00000013625	ENSAMXP00000002667	Uncharacterized protein.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.788
LOC103035115	LOC103040345	ENSAMXP00000019814	ENSAMXP00000006962	Ring finger and CCCH-type domains 1b.	Ring finger and CCCH-type domains 2.	0.578
LOC103040345	LOC103035115	ENSAMXP00000006962	ENSAMXP00000019814	Ring finger and CCCH-type domains 2.	Ring finger and CCCH-type domains 1b.	0.578
LOC103040345	rc3h1	ENSAMXP00000006962	ENSAMXP00000039649	Ring finger and CCCH-type domains 2.	Ring finger and CCCH-type domains 1a.	0.580