STRINGSTRING
kcnq1 kcnq1 LOC103038270 LOC103038270 LOC103028784 LOC103028784 f11r f11r ENSAMXP00000027926 ENSAMXP00000027926 ugcg ugcg Npc1 Npc1 NPC1L1 NPC1L1 fabp2 fabp2 W5K3Q4_ASTMX W5K3Q4_ASTMX W5KBN8_ASTMX W5KBN8_ASTMX LOC103022480 LOC103022480
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
kcnq1Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family. (662 aa)
LOC103038270Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (549 aa)
LOC103028784Potassium voltage-gated channel, KQT-like subfamily, member 1.2; Belongs to the potassium channel family. (734 aa)
f11rF11 receptor, tandem duplicate 1. (301 aa)
ENSAMXP00000027926Scavenger receptor class B, member 1; Belongs to the CD36 family. (480 aa)
ugcgUDP-glucose ceramide glucosyltransferase. (393 aa)
Npc1Niemann-Pick disease, type C1. (1190 aa)
NPC1L1NPC1 like intracellular cholesterol transporter 1. (1317 aa)
fabp2Fatty acid binding protein 2, intestinal; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (132 aa)
W5K3Q4_ASTMXLIM zinc-binding domain-containing protein. (77 aa)
W5KBN8_ASTMXLIM domain and actin binding 1a. (703 aa)
LOC103022480LIM zinc-binding domain-containing protein. (1356 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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