STRINGSTRING
W5LRA5_ASTMX W5LRA5_ASTMX HAND1 HAND1 tgfb1 tgfb1 LOC103024607 LOC103024607 W5LD66_ASTMX W5LD66_ASTMX LOC103022359 LOC103022359 mstn mstn LOC103029394 LOC103029394 ENSAMXP00000028486 ENSAMXP00000028486 LOC103025318 LOC103025318 med1 med1 LOC107197257 LOC107197257 ENSAMXP00000033131 ENSAMXP00000033131 TNNC1 TNNC1 zfpm2 zfpm2 Tnni1 Tnni1 LOC103021519 LOC103021519 ptcd2 ptcd2 ENSAMXP00000053345 ENSAMXP00000053345
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5LRA5_ASTMXUncharacterized protein. (157 aa)
HAND1Heart and neural crest derivatives expressed 1. (157 aa)
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
LOC103024607Transforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
W5LD66_ASTMXMothers against decapentaplegic homolog. (573 aa)
LOC103022359Mothers against decapentaplegic homolog. (587 aa)
mstnMyostatin b. (435 aa)
LOC103029394Mothers against decapentaplegic homolog. (544 aa)
ENSAMXP00000028486Mothers against decapentaplegic homolog. (493 aa)
LOC103025318NK2 homeobox 5. (313 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1801 aa)
LOC107197257Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family. (451 aa)
ENSAMXP00000033131G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (475 aa)
TNNC1Uncharacterized protein. (161 aa)
zfpm2Zinc finger protein, FOG family member 2a. (1151 aa)
Tnni1Troponin I type 1b (skeletal, slow). (170 aa)
LOC103021519Troponin C type 1b (slow). (214 aa)
ptcd2Pentatricopeptide repeat domain 2. (370 aa)
ENSAMXP00000053345MH1 domain-containing protein. (187 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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