36 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103027763	BAI1-associated protein 2a. (572 aa)
	ENSAMXP00000035901	COesterase domain-containing protein. (188 aa)
	LOC103031917	Solute carrier family 17 member 6b. (585 aa)
	igsf11	Immunoglobulin superfamily member 11. (458 aa)
	ENSAMXP00000032866	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1148 aa)
	LOC111193211	Uncharacterized protein. (515 aa)
	LOC103022054	Neuroligin 4 X-linked b. (813 aa)
	LOC103025423	Shisa family member 7. (643 aa)
	LOC103038528	Neuropilin (NRP) and tolloid (TLL)-like 1. (531 aa)
	lrrtm2	Leucine rich repeat transmembrane neuronal 2. (543 aa)
	LOC103024023	BAI1 associated protein 2. (528 aa)
	W5LM01_ASTMX	Solute carrier family 17 member 8. (590 aa)
	W5LBA0_ASTMX	Neuroligin 1. (586 aa)
	W5L9N9_ASTMX	Shisa family member 7a. (370 aa)
	SYNDIG1	Synapse differentiation inducing 1. (280 aa)
	LOC103032002	Integrin, alpha 3a; Belongs to the integrin alpha chain family. (995 aa)
	LOC103031626	Potassium inwardly-rectifying channel, subfamily J, member 3b. (539 aa)
	Nlgn3	Neuroligin 3a. (844 aa)
	LOC103031589	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1183 aa)
	adcy8	Adenylate cyclase type 8; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1228 aa)
	LOC103045798	Neuroligin 3b. (836 aa)
	nlgn2	Neuroligin 2a. (829 aa)
	LOC103040573	Integrin, alpha 3b; Belongs to the integrin alpha chain family. (1040 aa)
	LOC103045384	Potassium voltage-gated channel, subfamily J, member 19b. (514 aa)
	LOC103037384	Uncharacterized protein. (170 aa)
	ENSAMXP00000050086	Uncharacterized protein. (328 aa)
	LOC103024379	Solute carrier family 17 member 7a. (582 aa)
	ENSAMXP00000048784	Uncharacterized protein. (474 aa)
	Shisa6	Uncharacterized protein. (138 aa)
	bsn	Bassoon (presynaptic cytomatrix protein) b. (3757 aa)
	slc17a6	Solute carrier family 17 member 6a. (589 aa)
	LOC103023519	Potassium inwardly-rectifying channel, subfamily J, member 3a. (498 aa)
	neto1	Neuropilin (NRP) and tolloid (TLL)-like 1, like. (540 aa)
	ENSAMXP00000045779	Neuroligin 2b. (905 aa)
	LOC103022482	Neuroligin 4 X-linked a. (853 aa)
	LOC103042847	Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b. (170 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000035901	W5LBA0_ASTMX	ENSAMXP00000035901	ENSAMXP00000017112	COesterase domain-containing protein.	Neuroligin 1.	0.750
ENSAMXP00000050086	Shisa6	ENSAMXP00000050086	ENSAMXP00000048586	Uncharacterized protein.	Uncharacterized protein.	0.773
LOC103032002	LOC103040573	ENSAMXP00000015904	ENSAMXP00000055079	Integrin, alpha 3a; Belongs to the integrin alpha chain family.	Integrin, alpha 3b; Belongs to the integrin alpha chain family.	0.903
LOC103040573	LOC103032002	ENSAMXP00000055079	ENSAMXP00000015904	Integrin, alpha 3b; Belongs to the integrin alpha chain family.	Integrin, alpha 3a; Belongs to the integrin alpha chain family.	0.903
Shisa6	ENSAMXP00000050086	ENSAMXP00000048586	ENSAMXP00000050086	Uncharacterized protein.	Uncharacterized protein.	0.773
W5LBA0_ASTMX	ENSAMXP00000035901	ENSAMXP00000017112	ENSAMXP00000035901	Neuroligin 1.	COesterase domain-containing protein.	0.750