STRINGSTRING
LOC103032831 LOC103032831 meox2 meox2 fgf16 fgf16 ALX3 ALX3 pam pam ENSAMXP00000053345 ENSAMXP00000053345 LOC103033621 LOC103033621 pkdcc pkdcc ENSAMXP00000050565 ENSAMXP00000050565 arl6 arl6 LOC103041475 LOC103041475 LOC103037976 LOC103037976 taf10 taf10 LOC103030680 LOC103030680 bcl2l11 bcl2l11 slc7a11 slc7a11 intu intu tbx3 tbx3 RING1 RING1 sp8 sp8 ENSAMXP00000044959 ENSAMXP00000044959 dlx5 dlx5 lef1 lef1 hoxc8 hoxc8 W5K9M8_ASTMX W5K9M8_ASTMX map3k20 map3k20 Wdpcp Wdpcp ENSAMXP00000041750 ENSAMXP00000041750 ift52 ift52 en1 en1 ift140 ift140 LOC103046407 LOC103046407 sema3c sema3c ENSAMXP00000037031 ENSAMXP00000037031 etv4 etv4 fbxw4 fbxw4 ENSAMXP00000035369 ENSAMXP00000035369 MSX1 MSX1 LOC103032320 LOC103032320 kdf1 kdf1 hand2 hand2 Wdr19 Wdr19 CDH2 CDH2 Bmpr2 Bmpr2 fgf4 fgf4 LOC103024953 LOC103024953 LOC103041353 LOC103041353 med1 med1 tbx4 tbx4 ENSAMXP00000028486 ENSAMXP00000028486 shh shh kat2a kat2a LOC103029696 LOC103029696 W5LU11_ASTMX W5LU11_ASTMX W5LU02_ASTMX W5LU02_ASTMX osr1 osr1 fras1 fras1 W5LL88_ASTMX W5LL88_ASTMX LOC103029394 LOC103029394 sall1 sall1 LOC103022359 LOC103022359 dkk1 dkk1 foxn1 foxn1 rpgrip1l rpgrip1l W5LD66_ASTMX W5LD66_ASTMX Sp9 Sp9 LOC103026885 LOC103026885 osr2 osr2 itgb4 itgb4 W5L3I5_ASTMX W5L3I5_ASTMX W5L312_ASTMX W5L312_ASTMX W5L115_ASTMX W5L115_ASTMX bbs7 bbs7 LOC103045402 LOC103045402 W5KY31_ASTMX W5KY31_ASTMX Med12 Med12 LOC103024223 LOC103024223 W5KQQ4_ASTMX W5KQQ4_ASTMX Tbx5 Tbx5 W5KN49_ASTMX W5KN49_ASTMX LOC103047816 LOC103047816 W5KIU0_ASTMX W5KIU0_ASTMX nipbl nipbl LOC103040345 LOC103040345 LOC103040212 LOC103040212 Frem3 Frem3 rnf2 rnf2 Bax Bax Pi4k2b Pi4k2b pdlim7 pdlim7 sec23a sec23a LOC103032217 LOC103032217 crbn crbn W5K2Q9_ASTMX W5K2Q9_ASTMX sall4 sall4 W5JXX2_ASTMX W5JXX2_ASTMX
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103032831Spalt-like transcription factor 3a. (1332 aa)
meox2Mesenchyme homeobox 2a. (291 aa)
fgf16Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (206 aa)
ALX3ALX homeobox 3. (359 aa)
pamPeptidylglycine alpha-amidating monooxygenase. (1006 aa)
ENSAMXP00000053345MH1 domain-containing protein. (187 aa)
LOC103033621Spalt-like transcription factor 1b. (1301 aa)
pkdccProtein kinase domain containing, cytoplasmic a. (476 aa)
ENSAMXP00000050565Dickkopf WNT signaling pathway inhibitor 1a. (277 aa)
arl6ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family. (206 aa)
LOC103041475Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1048 aa)
LOC103037976Homeobox protein engrailed-like. (286 aa)
taf10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (192 aa)
LOC103030680Cadherin 2, type 1, N-cadherin (neuronal); Cadherins are calcium-dependent cell adhesion proteins. (898 aa)
bcl2l11Bclx_interact domain-containing protein. (203 aa)
slc7a11Solute carrier family 7 member 11. (488 aa)
intuInturned planar cell polarity protein. (958 aa)
tbx3T-box transcription factor 3a. (706 aa)
RING1Ring finger protein 1. (377 aa)
sp8Sp8 transcription factor a. (459 aa)
ENSAMXP00000044959ATRX chromatin remodeler, like. (1613 aa)
dlx5Distal-less homeobox 5a. (276 aa)
lef1Lymphoid enhancer-binding factor 1. (384 aa)
hoxc8Homeobox C8a. (254 aa)
W5K9M8_ASTMXUncharacterized protein. (174 aa)
map3k20Uncharacterized protein. (888 aa)
WdpcpUncharacterized protein. (98 aa)
ENSAMXP00000041750Uncharacterized protein. (104 aa)
ift52Intraflagellar transport 52 homolog (Chlamydomonas). (435 aa)
en1Homeobox protein engrailed-like. (227 aa)
ift140Intraflagellar transport 140 homolog (Chlamydomonas). (1257 aa)
LOC103046407Protein kinase domain containing, cytoplasmic b. (464 aa)
sema3cSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; Belongs to the semaphorin family. (743 aa)
ENSAMXP00000037031MKS transition zone complex subunit 1. (534 aa)
etv4Ets variant 4. (520 aa)
fbxw4F-box and WD repeat domain containing 4. (393 aa)
ENSAMXP00000035369Ring finger protein 165a. (321 aa)
MSX1Msh homeobox 1. (201 aa)
LOC103032320Homeobox C10a. (348 aa)
kdf1Keratinocyte differentiation factor 1a. (434 aa)
hand2Heart and neural crest derivatives expressed 2. (200 aa)
Wdr19WD repeat domain 19. (1339 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (903 aa)
Bmpr2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1070 aa)
fgf4Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (191 aa)
LOC103024953Ring finger protein 165b. (351 aa)
LOC103041353Mesenchyme homeobox 2b. (300 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1801 aa)
tbx4T-box transcription factor 4. (558 aa)
ENSAMXP00000028486Mothers against decapentaplegic homolog. (493 aa)
shhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (429 aa)
kat2aK(lysine) acetyltransferase 2A. (855 aa)
LOC103029696Uncharacterized protein. (205 aa)
W5LU11_ASTMXBHLH domain-containing protein. (305 aa)
W5LU02_ASTMXGremlin. (175 aa)
osr1Odd-skipped related transcription factor 1. (264 aa)
fras1Fraser extracellular matrix complex subunit 1. (3998 aa)
W5LL88_ASTMXSp8 transcription factor. (441 aa)
LOC103029394Mothers against decapentaplegic homolog. (544 aa)
sall1Spalt-like transcription factor 1a. (1308 aa)
LOC103022359Mothers against decapentaplegic homolog. (587 aa)
dkk1Dickkopf WNT signaling pathway inhibitor 1b. (243 aa)
foxn1Forkhead box N1. (582 aa)
rpgrip1lRPGRIP1 like. (1277 aa)
W5LD66_ASTMXMothers against decapentaplegic homolog. (573 aa)
Sp9Sp9 transcription factor. (443 aa)
LOC103026885Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (796 aa)
osr2Odd-skipped related transciption factor 2. (274 aa)
itgb4Integrin beta. (1986 aa)
W5L3I5_ASTMXATRX chromatin remodeler. (1989 aa)
W5L312_ASTMXIntraflagellar transport 80 homolog (Chlamydomonas). (768 aa)
W5L115_ASTMXProtein kinase domain-containing protein. (440 aa)
bbs7Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. (715 aa)
LOC103045402FRAS1 related extracellular matrix 2b. (3110 aa)
W5KY31_ASTMXUncharacterized protein. (154 aa)
Med12Mediator complex subunit 12. (2026 aa)
LOC103024223Secreted frizzled-related protein 2 like. (312 aa)
W5KQQ4_ASTMXR-spondin 4. (276 aa)
Tbx5T-box transcription factor 5a. (522 aa)
W5KN49_ASTMXUncharacterized protein; Belongs to the heparin-binding growth factors family. (67 aa)
LOC103047816Zgc:153993. (204 aa)
W5KIU0_ASTMXMKS transition zone complex subunit 1. (528 aa)
nipblNipped-B protein. (2745 aa)
LOC103040345Ring finger and CCCH-type domains 2. (1061 aa)
LOC103040212Basic helix-loop-helix family, member a9. (294 aa)
Frem3Fras1 related extracellular matrix 3. (3111 aa)
rnf2Ring finger protein 2. (336 aa)
BaxBCL2 associated X, apoptosis regulator a. (190 aa)
Pi4k2bPhosphatidylinositol 4-kinase type 2 beta. (469 aa)
pdlim7PDZ and LIM domain 7. (509 aa)
sec23aProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (765 aa)
LOC103032217Dickkopf_N domain-containing protein. (277 aa)
crbnCereblon. (445 aa)
W5K2Q9_ASTMXKringle containing transmembrane protein 1. (426 aa)
sall4Spalt-like transcription factor 4. (1107 aa)
W5JXX2_ASTMXUncharacterized protein. (125 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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