STRINGSTRING
LOC103026885 LOC103026885 tgfbr2 tgfbr2 Trip11 Trip11 LOC103044922 LOC103044922 LOC103045279 LOC103045279 LOC103043606 LOC103043606 LOC103042468 LOC103042468 LOC103047714 LOC103047714 kat2a kat2a LOC103042774 LOC103042774 ENSAMXP00000029247 ENSAMXP00000029247 fgf4 fgf4 Bmpr2 Bmpr2 LOC103033177 LOC103033177 edar edar LOC103028218 LOC103028218 zmpste24 zmpste24 dhrs3 dhrs3 MSX1 MSX1 LOC103042886 LOC103042886 ENSAMXP00000040343 ENSAMXP00000040343 anxa6 anxa6 LOC103039097 LOC103039097 LOC103042559 LOC103042559 rap1b rap1b wnt5a wnt5a ext2 ext2 foxn3 foxn3 LOC103026589 LOC103026589 pex7 pex7 LOC103029481 LOC103029481 LOC103038759 LOC103038759 atg9a atg9a sp5 sp5 LOC103046764 LOC103046764 LOC103041475 LOC103041475 LOC103022868 LOC103022868 frem1 frem1 mef2d mef2d rap1a rap1a W5L312_ASTMX W5L312_ASTMX W5L1E4_ASTMX W5L1E4_ASTMX W5L4C1_ASTMX W5L4C1_ASTMX rab23 rab23 W5KQ85_ASTMX W5KQ85_ASTMX W5KN49_ASTMX W5KN49_ASTMX
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103026885Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (796 aa)
tgfbr2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (595 aa)
Trip11Thyroid hormone receptor interactor 11. (1949 aa)
LOC103044922Dehydrogenase/reductase (SDR family) member 3a; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (303 aa)
LOC103045279Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (381 aa)
LOC103043606Uncharacterized protein. (347 aa)
LOC103042468Uncharacterized protein. (347 aa)
LOC103047714Transmembrane protein 119b. (295 aa)
kat2aK(lysine) acetyltransferase 2A. (855 aa)
LOC103042774Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a; Belongs to the serpin family. (403 aa)
ENSAMXP00000029247Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (361 aa)
fgf4Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (191 aa)
Bmpr2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1070 aa)
LOC103033177Cytochrome P450, family 26, subfamily b, polypeptide 1; Belongs to the cytochrome P450 family. (511 aa)
edarEctodysplasin A receptor. (468 aa)
LOC103028218Golgi glycoprotein 1a. (1152 aa)
zmpste24CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (470 aa)
dhrs3Dehydrogenase/reductase (SDR family) member 3b. (321 aa)
MSX1Msh homeobox 1. (201 aa)
LOC103042886Cholinergic receptor, nicotinic, alpha 1 (muscle). (481 aa)
ENSAMXP00000040343Tsukushi small leucine rich proteoglycan homolog (Xenopus laevis). (342 aa)
anxa6Annexin. (667 aa)
LOC103039097Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b; Belongs to the serpin family. (408 aa)
LOC103042559Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (543 aa)
rap1bRAP1B, member of RAS oncogene family. (184 aa)
wnt5aProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (373 aa)
ext2Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family. (720 aa)
foxn3Forkhead box N3. (452 aa)
LOC103026589Fras1 related extracellular matrix 1b. (2158 aa)
pex7Peroxisomal biogenesis factor 7. (319 aa)
LOC103029481Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family. (208 aa)
LOC103038759Golgi glycoprotein 1b. (1147 aa)
atg9aAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (846 aa)
sp5Sp5 transcription factor a. (374 aa)
LOC103046764Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (210 aa)
LOC103041475Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1048 aa)
LOC103022868RAP1A, member of RAS oncogene family b. (185 aa)
frem1Fras1 related extracellular matrix 1a. (2182 aa)
mef2dMyocyte enhancer factor 2d. (571 aa)
rap1aRAP1A, member of RAS oncogene family a. (195 aa)
W5L312_ASTMXIntraflagellar transport 80 homolog (Chlamydomonas). (768 aa)
W5L1E4_ASTMXAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (744 aa)
W5L4C1_ASTMXNGFI-A binding protein 2 (EGR1 binding protein 2). (459 aa)
rab23RAB23, member RAS oncogene family. (237 aa)
W5KQ85_ASTMXCheckpoint suppressor 1. (334 aa)
W5KN49_ASTMXUncharacterized protein; Belongs to the heparin-binding growth factors family. (67 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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