22 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSAMXP00000037899	MADS-box domain-containing protein. (356 aa)
	hhip	Hedgehog interacting protein. (693 aa)
	ENSAMXP00000042872	Uncharacterized protein. (98 aa)
	ENSAMXP00000041681	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (273 aa)
	W5K0L4_ASTMX	MADS-box domain-containing protein. (479 aa)
	LOC103033117	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (302 aa)
	hps1	HPS1 biogenesis of lysosomal organelles complex 3 subunit 1. (672 aa)
	W5KA92_ASTMX	Discs, large homolog 5b (Drosophila), tandem duplicate 1; Belongs to the MAGUK family. (1806 aa)
	ctsz	Cathepsin Z; Belongs to the peptidase C1 family. (302 aa)
	W5KU03_ASTMX	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (288 aa)
	Dag1	Dystroglycan 1. (874 aa)
	LOC103029625	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (364 aa)
	tgfbr2	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (595 aa)
	stk40	Serine/threonine kinase 40. (436 aa)
	SRF	Serum response factor. (527 aa)
	Wnt2b	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (558 aa)
	ctsh	Cathepsin H; Belongs to the peptidase C1 family. (333 aa)
	LOC103042559	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (543 aa)
	spry1	Sprouty homolog 1, antagonist of FGF signaling (Drosophila). (359 aa)
	ENSAMXP00000050201	Pept_C1 domain-containing protein. (228 aa)
	Dlg5	Discs, large homolog 5a (Drosophila); Belongs to the MAGUK family. (1945 aa)
	LOC103031663	Transcription factor 21. (182 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000042872	spry1	ENSAMXP00000042872	ENSAMXP00000047693	Uncharacterized protein.	Sprouty homolog 1, antagonist of FGF signaling (Drosophila).	0.646
LOC103042559	tgfbr2	ENSAMXP00000043824	ENSAMXP00000021003	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.902
spry1	ENSAMXP00000042872	ENSAMXP00000047693	ENSAMXP00000042872	Sprouty homolog 1, antagonist of FGF signaling (Drosophila).	Uncharacterized protein.	0.646
tgfbr2	LOC103042559	ENSAMXP00000021003	ENSAMXP00000043824	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.902