34 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fmr1	Fragile X mental retardation 1. (570 aa)
	W5KA92_ASTMX	Discs, large homolog 5b (Drosophila), tandem duplicate 1; Belongs to the MAGUK family. (1806 aa)
	LOC103035197	Cell cycle associated protein 1b. (695 aa)
	W5KHK9_ASTMX	Drebrin 1. (497 aa)
	W5KL43_ASTMX	Uncharacterized protein. (1909 aa)
	LOC103043830	Ephrin-A1a; Belongs to the ephrin family. (224 aa)
	ube3a	Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates. (873 aa)
	W5L338_ASTMX	Si:dkey-40c11.2. (704 aa)
	TANC2	Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2. (1963 aa)
	RELN	Reelin. (3447 aa)
	Dhx36	DEAH (Asp-Glu-Ala-His) box polypeptide 36. (909 aa)
	W5LN37_ASTMX	SH3 and multiple ankyrin repeat domains 2a. (1756 aa)
	LOC103024023	BAI1 associated protein 2. (528 aa)
	ARF6	ADP ribosylation factor 6. (116 aa)
	W5LTZ3_ASTMX	ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family. (120 aa)
	eef2k	Eukaryotic elongation factor 2 kinase. (759 aa)
	ENSAMXP00000032110	ANK_REP_REGION domain-containing protein. (269 aa)
	LOC103029310	Caprin family member 2. (972 aa)
	dbnl	Drebrin-like b. (470 aa)
	LOC103033969	Drebrin-like a. (488 aa)
	llph	LLP homolog, long-term synaptic facilitation factor. (126 aa)
	c20h21orf91	Zgc:110006. (279 aa)
	LOC107197551	DNA-binding protein SATB. (877 aa)
	LOC103027763	BAI1-associated protein 2a. (572 aa)
	LOC103038576	SH3 and multiple ankyrin repeat domains 3b. (1639 aa)
	cux2	Homeobox protein cut-like. (1523 aa)
	LOC103022285	Cell cycle associated protein 1a. (721 aa)
	ENSAMXP00000045469	SH3 and multiple ankyrin repeat domains 1. (1896 aa)
	mapkapk5	MAPK activated protein kinase 5. (473 aa)
	GRIN3A	Glutamate ionotropic receptor NMDA type subunit 3A. (1144 aa)
	LOC103021450	Ephrin-A1b; Belongs to the ephrin family. (233 aa)
	ENSAMXP00000052590	ANK_REP_REGION domain-containing protein. (133 aa)
	Dlg5	Discs, large homolog 5a (Drosophila); Belongs to the MAGUK family. (1945 aa)
	mapk6	Mitogen-activated protein kinase 6. (731 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Dlg5	ENSAMXP00000045469	ENSAMXP00000052816	ENSAMXP00000045469	Discs, large homolog 5a (Drosophila); Belongs to the MAGUK family.	SH3 and multiple ankyrin repeat domains 1.	0.576
Dlg5	LOC103038576	ENSAMXP00000052816	ENSAMXP00000038092	Discs, large homolog 5a (Drosophila); Belongs to the MAGUK family.	SH3 and multiple ankyrin repeat domains 3b.	0.576
Dlg5	W5LN37_ASTMX	ENSAMXP00000052816	ENSAMXP00000021249	Discs, large homolog 5a (Drosophila); Belongs to the MAGUK family.	SH3 and multiple ankyrin repeat domains 2a.	0.576
ENSAMXP00000032110	ENSAMXP00000052590	ENSAMXP00000032110	ENSAMXP00000052590	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.911
ENSAMXP00000045469	Dlg5	ENSAMXP00000045469	ENSAMXP00000052816	SH3 and multiple ankyrin repeat domains 1.	Discs, large homolog 5a (Drosophila); Belongs to the MAGUK family.	0.576
ENSAMXP00000045469	W5KA92_ASTMX	ENSAMXP00000045469	ENSAMXP00000004503	SH3 and multiple ankyrin repeat domains 1.	Discs, large homolog 5b (Drosophila), tandem duplicate 1; Belongs to the MAGUK family.	0.576
ENSAMXP00000052590	ENSAMXP00000032110	ENSAMXP00000052590	ENSAMXP00000032110	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.911
LOC103022285	fmr1	ENSAMXP00000040773	ENSAMXP00000000379	Cell cycle associated protein 1a.	Fragile X mental retardation 1.	0.604
LOC103035197	fmr1	ENSAMXP00000005278	ENSAMXP00000000379	Cell cycle associated protein 1b.	Fragile X mental retardation 1.	0.604
LOC103038576	Dlg5	ENSAMXP00000038092	ENSAMXP00000052816	SH3 and multiple ankyrin repeat domains 3b.	Discs, large homolog 5a (Drosophila); Belongs to the MAGUK family.	0.576
LOC103038576	W5KA92_ASTMX	ENSAMXP00000038092	ENSAMXP00000004503	SH3 and multiple ankyrin repeat domains 3b.	Discs, large homolog 5b (Drosophila), tandem duplicate 1; Belongs to the MAGUK family.	0.576
W5KA92_ASTMX	ENSAMXP00000045469	ENSAMXP00000004503	ENSAMXP00000045469	Discs, large homolog 5b (Drosophila), tandem duplicate 1; Belongs to the MAGUK family.	SH3 and multiple ankyrin repeat domains 1.	0.576
W5KA92_ASTMX	LOC103038576	ENSAMXP00000004503	ENSAMXP00000038092	Discs, large homolog 5b (Drosophila), tandem duplicate 1; Belongs to the MAGUK family.	SH3 and multiple ankyrin repeat domains 3b.	0.576
W5KA92_ASTMX	W5LN37_ASTMX	ENSAMXP00000004503	ENSAMXP00000021249	Discs, large homolog 5b (Drosophila), tandem duplicate 1; Belongs to the MAGUK family.	SH3 and multiple ankyrin repeat domains 2a.	0.576
W5LN37_ASTMX	Dlg5	ENSAMXP00000021249	ENSAMXP00000052816	SH3 and multiple ankyrin repeat domains 2a.	Discs, large homolog 5a (Drosophila); Belongs to the MAGUK family.	0.576
W5LN37_ASTMX	W5KA92_ASTMX	ENSAMXP00000021249	ENSAMXP00000004503	SH3 and multiple ankyrin repeat domains 2a.	Discs, large homolog 5b (Drosophila), tandem duplicate 1; Belongs to the MAGUK family.	0.576
fmr1	LOC103022285	ENSAMXP00000000379	ENSAMXP00000040773	Fragile X mental retardation 1.	Cell cycle associated protein 1a.	0.604
fmr1	LOC103035197	ENSAMXP00000000379	ENSAMXP00000005278	Fragile X mental retardation 1.	Cell cycle associated protein 1b.	0.604
fmr1	ube3a	ENSAMXP00000000379	ENSAMXP00000013316	Fragile X mental retardation 1.	Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.	0.566
mapk6	mapkapk5	ENSAMXP00000053334	ENSAMXP00000048184	Mitogen-activated protein kinase 6.	MAPK activated protein kinase 5.	0.954