STRINGSTRING
Sox6 Sox6 Sox5 Sox5 W5L0W7_ASTMX W5L0W7_ASTMX W5LMT7_ASTMX W5LMT7_ASTMX ccn1 ccn1 Bmpr2 Bmpr2 LOC103031084 LOC103031084 LOC103042873 LOC103042873 LOC103029324 LOC103029324 LOC103046407 LOC103046407 LOC103038627 LOC103038627 ENSAMXP00000042098 ENSAMXP00000042098 LOC103031258 LOC103031258 bmp4 bmp4 LOC103029481 LOC103029481 LOC103046764 LOC103046764 LOC103041475 LOC103041475 bmp10 bmp10 pkdcc pkdcc
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sox6SRY-box transcription factor 6. (787 aa)
Sox5SRY-box transcription factor 5. (763 aa)
W5L0W7_ASTMXTransmembrane anterior posterior transformation 1b. (553 aa)
W5LMT7_ASTMXLysyl oxidase-like 2a. (720 aa)
ccn1Cellular communication network factor 1. (372 aa)
Bmpr2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1070 aa)
LOC103031084Bone morphogenetic protein 10, like. (462 aa)
LOC103042873Midkine a. (145 aa)
LOC103029324Bone morphogenetic protein 16. (430 aa)
LOC103046407Protein kinase domain containing, cytoplasmic b. (464 aa)
LOC103038627Transmembrane anterior posterior transformation 1a. (591 aa)
ENSAMXP00000042098Midkine b. (157 aa)
LOC103031258Lysyl oxidase-like 2b. (770 aa)
bmp4TGF_BETA_2 domain-containing protein. (481 aa)
LOC103029481Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family. (208 aa)
LOC103046764Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (210 aa)
LOC103041475Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1048 aa)
bmp10Bone morphogenetic protein 10. (492 aa)
pkdccProtein kinase domain containing, cytoplasmic a. (476 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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