39 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DGKQ	Diacylglycerol kinase. (911 aa)
	NOX4	NADPH oxidase 4. (481 aa)
	LOC103037777	Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family. (528 aa)
	LOC103041996	ADAM metallopeptidase domain 17b. (841 aa)
	UNC119	Unc-119 lipid binding chaperone. (142 aa)
	ncf1	Neutrophil cytosolic factor 1. (417 aa)
	agt	Angiotensinogen; Belongs to the serpin family. (456 aa)
	LOC103043830	Ephrin-A1a; Belongs to the ephrin family. (224 aa)
	LOC103021849	G protein-coupled receptor, class C, group 5, member Bb. (428 aa)
	Ercc6	Excision repair cross-complementation group 6. (1400 aa)
	LOC103038722	ALK and LTK ligand 2b. (155 aa)
	RELN	Reelin. (3447 aa)
	W5LD95_ASTMX	ADAM metallopeptidase domain 17a. (675 aa)
	W5LM11_ASTMX	Neuregulin 2a. (504 aa)
	W5LQA2_ASTMX	P21 protein (Cdc42/Rac)-activated kinase 2b; Belongs to the protein kinase superfamily. (489 aa)
	LOC103043885	Unc-119 homolog b (C. elegans). (265 aa)
	LOC103026512	Gremlin 2, DAN family BMP antagonist a. (195 aa)
	W5LU02_ASTMX	Gremlin. (175 aa)
	ENSAMXP00000027280	Abl-interactor 1a. (461 aa)
	il34	Interleukin 34. (210 aa)
	cass4	Cas scaffold protein family member 4. (802 aa)
	LOC103032641	Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (526 aa)
	LOC111191478	Betacellulin, epidermal growth factor family member. (183 aa)
	LOC103025626	Heparin-binding EGF-like growth factor b. (213 aa)
	ENSAMXP00000037126	Docking protein 7. (589 aa)
	epgn	Epithelial mitogen homolog (mouse). (155 aa)
	nrg1	Neuregulin 1. (726 aa)
	gas6	Uncharacterized protein. (659 aa)
	LOC103043517	Abl-interactor 1b. (465 aa)
	LOC103025917	Docking protein 7. (872 aa)
	gprc5b	G protein-coupled receptor, class C, group 5, member Ba. (391 aa)
	LOC103044858	Transforming growth factor, alpha. (186 aa)
	LOC103042778	Neuregulin 2b. (838 aa)
	LOC103027828	Heparin-binding EGF-like growth factor a. (241 aa)
	LOC111192618	ALK and LTK ligand 1. (154 aa)
	W5K3Q6_ASTMX	Ghrelin/obestatin prepropeptide. (129 aa)
	ENSAMXP00000054922	Non-specific serine/threonine protein kinase. (612 aa)
	LOC103021450	Ephrin-A1b; Belongs to the ephrin family. (233 aa)
	LOC103031040	ALK and LTK ligand 2b. (160 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000027280	ENSAMXP00000054922	ENSAMXP00000027280	ENSAMXP00000054922	Abl-interactor 1a.	Non-specific serine/threonine protein kinase.	0.438
ENSAMXP00000027280	W5LQA2_ASTMX	ENSAMXP00000027280	ENSAMXP00000022199	Abl-interactor 1a.	P21 protein (Cdc42/Rac)-activated kinase 2b; Belongs to the protein kinase superfamily.	0.438
ENSAMXP00000027280	cass4	ENSAMXP00000027280	ENSAMXP00000034084	Abl-interactor 1a.	Cas scaffold protein family member 4.	0.482
ENSAMXP00000054922	ENSAMXP00000027280	ENSAMXP00000054922	ENSAMXP00000027280	Non-specific serine/threonine protein kinase.	Abl-interactor 1a.	0.438
ENSAMXP00000054922	LOC103043517	ENSAMXP00000054922	ENSAMXP00000042118	Non-specific serine/threonine protein kinase.	Abl-interactor 1b.	0.438
LOC103025626	LOC103027828	ENSAMXP00000035224	ENSAMXP00000049923	Heparin-binding EGF-like growth factor b.	Heparin-binding EGF-like growth factor a.	0.905
LOC103025626	LOC103042778	ENSAMXP00000035224	ENSAMXP00000044866	Heparin-binding EGF-like growth factor b.	Neuregulin 2b.	0.411
LOC103025626	LOC103044858	ENSAMXP00000035224	ENSAMXP00000044810	Heparin-binding EGF-like growth factor b.	Transforming growth factor, alpha.	0.670
LOC103025626	LOC111191478	ENSAMXP00000035224	ENSAMXP00000035172	Heparin-binding EGF-like growth factor b.	Betacellulin, epidermal growth factor family member.	0.720
LOC103025626	W5LM11_ASTMX	ENSAMXP00000035224	ENSAMXP00000020873	Heparin-binding EGF-like growth factor b.	Neuregulin 2a.	0.411
LOC103025626	epgn	ENSAMXP00000035224	ENSAMXP00000038795	Heparin-binding EGF-like growth factor b.	Epithelial mitogen homolog (mouse).	0.662
LOC103025626	nrg1	ENSAMXP00000035224	ENSAMXP00000040808	Heparin-binding EGF-like growth factor b.	Neuregulin 1.	0.411
LOC103027828	LOC103025626	ENSAMXP00000049923	ENSAMXP00000035224	Heparin-binding EGF-like growth factor a.	Heparin-binding EGF-like growth factor b.	0.905
LOC103027828	LOC103042778	ENSAMXP00000049923	ENSAMXP00000044866	Heparin-binding EGF-like growth factor a.	Neuregulin 2b.	0.411
LOC103027828	LOC103044858	ENSAMXP00000049923	ENSAMXP00000044810	Heparin-binding EGF-like growth factor a.	Transforming growth factor, alpha.	0.670
LOC103027828	LOC111191478	ENSAMXP00000049923	ENSAMXP00000035172	Heparin-binding EGF-like growth factor a.	Betacellulin, epidermal growth factor family member.	0.720
LOC103027828	W5LM11_ASTMX	ENSAMXP00000049923	ENSAMXP00000020873	Heparin-binding EGF-like growth factor a.	Neuregulin 2a.	0.411
LOC103027828	epgn	ENSAMXP00000049923	ENSAMXP00000038795	Heparin-binding EGF-like growth factor a.	Epithelial mitogen homolog (mouse).	0.662
LOC103027828	nrg1	ENSAMXP00000049923	ENSAMXP00000040808	Heparin-binding EGF-like growth factor a.	Neuregulin 1.	0.411
LOC103032641	LOC103037777	ENSAMXP00000035083	ENSAMXP00000004681	Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family.	Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family.	0.906