STRINGSTRING
LOC103035022 LOC103035022 W5LTC8_ASTMX W5LTC8_ASTMX gdf5 gdf5 fzd4 fzd4 LOC103041897 LOC103041897 lmo2 lmo2 Bmpr2 Bmpr2 LOC103036816 LOC103036816 ndp ndp LOC103041475 LOC103041475 ENSAMXP00000035888 ENSAMXP00000035888
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103035022Growth differentiation factor 6a. (406 aa)
W5LTC8_ASTMXCytochrome P450, family 1, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (523 aa)
gdf5Growth differentiation factor 5. (431 aa)
fzd4Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family. (526 aa)
LOC103041897V-set and transmembrane domain containing 4b. (317 aa)
lmo2LIM domain only 2 (rhombotin-like 1). (159 aa)
Bmpr2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1070 aa)
LOC103036816Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (526 aa)
ndpNorrin cystine knot growth factor NDP. (138 aa)
LOC103041475Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1048 aa)
ENSAMXP00000035888V-set and transmembrane domain containing 4a. (156 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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